Plectropomus leopardus (leopard coralgrouper): 121944384
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Entry
121944384 CDS
T07454
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121944384 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plep03041
]
121944384 (usp39)
Spliceosome [BR:
plep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
121944384 (usp39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
121944384
NCBI-ProteinID:
XP_042344087
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All DBs
Position
6:complement(19244093..19250332)
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AA seq
501 aa
AA seq
DB search
MKVSLKREREAEVDDDDNEDRVAAKVARGRVVEDRRSRHCPYLDTINRSVLDFDFEKLCS
ISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSS
LEDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSN
VPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVL
CSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKASIITKAFQGSMRIFSKKLPHPDLT
PEEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGST
EKEYKTYKENFLKRFQLTKLPPYLVFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTE
EAQVTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSE
AYIQIWKRQESDDDTNNHTGV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttctctgaagcgagaaagagaggctgaagtggacgacgatgacaacgaagac
agagtggcagccaaagtagccagaggacgtgttgtagaagaccggagaagtcgccactgc
ccttaccttgacaccataaacaggagtgtgctggacttcgactttgagaaactgtgctcc
atctctctctcccacatcaatgtatatgcctgccttatatgtggaaaatactttcaaggg
agaggtttgaagtcccatgcctacactcacagtgtacagtttacccatcacgtgttcctg
aatctgcacactctaaagttttactgtctgccagacaactatgagatcattgactcttct
ctagaagatatcacatatgtgctgaaaccaactttcaccaagcagcacattgcagggttg
gacaagcagggtaaactgtaccgagcgtacgatggtacgacctacctgccaggtattgtt
gggcttaacaacatcaaagccaatgactacgccaatgtggtgttgcaggcattttccaat
gttccacctttgcgaaactacttcctggaggaggaaaactacaggggaatccgcaggcca
ccgggggacatcatgtttctcttggtgcagcgatttggagagctgatgcgcaaactctgg
aatccaagaaactttaaggcccatgtgtctccacatgagatgctgcaggctgtggtgctt
tgcagcaagaagaacttccagattaccaagcaaggagatgctgtggacttcatgacgtgg
ttcttgaatgctctgcatggtgctcttggaggcacaaagaagaaagcatcaatcattaca
aaagcatttcaaggctccatgcggatcttctccaagaagcttccacacccagatttaaca
ccagaggagaaagaggcactactcgtgacagaggagtaccaggagcagatgtctgagtcc
accttcctgtttctgacccttgacctcccgactgctccgctgtacaaagatgagaaggag
cagctcattattccgcaggtccccctcttcaacatcctgggcaagttcaatggcagcaca
gagaaggagtacaaaacctacaaagagaattttctcaaaaggttccagctgaccaaactg
cctccgtacctcgtcttttgcatcaaaagattcaccaagaacaacttctttgtggaaaag
aaccccacaattgtcaactttccgatcacgaacgttgacctccgtgagtacttgacagaa
gaagctcaagtaacagagaaaaacacaacttatgacctcgtcgccaatgtagtgcatgat
gggaaacccactgagggagcgtacagaatacatgttctgcatcatggaactgggaagtgg
tacgagatgcaggacctgcaggtgactgacattcttccccagatgatcacgttgtcagag
gcctacatccagatctggaagagacaagagagcgacgatgacacaaacaaccacacaggg
gtgtaa
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