Plectropomus leopardus (leopard coralgrouper): 121945026
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Entry
121945026 CDS
T07454
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121945026 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121945026 (smarca2)
03036 Chromosome and associated proteins [BR:
plep03036
]
121945026 (smarca2)
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121945026 (smarca2)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121945026 (smarca2)
Chromatin remodeling factors
BAF complex
121945026 (smarca2)
PBAF complex
121945026 (smarca2)
GBAF(ncBAF) complex
121945026 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
121945026
NCBI-ProteinID:
XP_042344957
LinkDB
All DBs
Position
6:32590889..32648271
Genome browser
AA seq
1593 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDSMYPMHKTMEGMNEKAMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGGGPTPPHMPPSQSGPMMPMDPQSGVPNMSNMSQ
QGRGPSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQQQQ
QQQQQQQQQQAPSVSPYNRPPGMPMAPLGGPQSSPCPTPTMQGHSQSTGPKPWSDGQGGE
NQASAQKHLTPVTSGRPSPAPPQASAVPPGPMPGASVTPQPPGQQVSPMLQMQKQNRVTP
IQKPQGLDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQR
QLRQDVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQE
YLNSILQHAKDFKEYHRSVSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAED
EEGYRKLIDQKKDKRLAYLLQQTDEYVANLTTLVHEHKAAQAAKEKKKRKKKKKRVDGDG
EGPSAIGPDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAP
RSDSEESGSEFEEEEEEEGAKAEPEEKKIIDDEDAVQQADTKHIIESAKQDVDDEYSVPT
GQTSSQSYYGVAHAVIERVEKQSSLLVNGTLKHYQIQGLEWMVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPVLRRG
LVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCTTFEQWFNAPFAMTGERVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVVKCDMSAIQKVLYRHMQKGILLTDGSEK
DKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGFISGLDLYRASGKFEL
LDRILPKLQATNHRVLLFCQMTTLMTIMEDYFSYRNFQYLRLDGTTKSEDRAALLKKFNE
EGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL
CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILETEEQNEEEDEIP
DDETLNQMIARNEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDEAEVERL
TYEEEEEKMFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDK
DSSSRDDGGSKAKKKRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGSGRQLSEVFVQL
PSRKELPEYYELIRKPVDFKKIKDRVRSHKYRGVGDLERDVMLLCHNAQTFNLEGSQIYE
DSIVLQSVFKSARQKIAKDEESEDDSDEDDEDEDESEAEAKSVRVKIKLSKEARSQDKGK
KRQSRGKAKPVVSDDDSDDDLDDNDQSDKSDDE
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcagacacatcaggtggtatgtcccatcctggcccttctccgggggca
ggtctatccccagggcccatcctgggccccagccctggaccggacccctcaccaggctct
gttcacagtatgatgggacccagtcctggacctggtacacccaacgctcctcatggcatg
cagggccagggacaaagtgactactctcaggacagcatgtaccctatgcacaagaccatg
gaagggatgaacgagaaggccatggcggatgcaatgcactttggtcacatgaaaggtgta
gggatgagatctctgcacagcggtatggggcctccacagagtccgatggaccagcacagc
caaggatacatgtccccccatccatcccccatgggtgtccatgagcatgcttccagtccc
atgtcaggaggtggaggcggtgggggacccacgccgccccacatgcctccctcccagtca
ggccctatgatgcccatggatccacagtcaggggtgcccaacatgtccaacatgagccag
caggggcggggaccttctgctttcagtccggtccagctgcagcagctcagagctcagatc
ctagcctacaagatcctgggccgtgggcaaccactgcctgaaaacctccagctggctgtt
cagggcaagaggagcctacccacaatgcagcagcagcagcaacaacaacaacaacagcag
cagcaacagcagcagcagcagcagcagcaggcacctagtgttagtccttacaacaggcct
ccaggtatgccaatggcacctttgggtggtccccagtcaagtccctgccctaccccgacc
atgcaaggacacagtcaaagcacaggacccaagccttggtctgatggtcagggtggtgag
aatcaagccagcgctcagaagcacctcactccagtcaccagtggacgtccgtcccctgca
ccacctcaggcctcggctgtgccacctgggcccatgccaggcgcttcagtgacccctcag
cctcccgggcagcaggtgtcccccatgctccagatgcagaaacagaaccgcgtcacacca
atccagaagccccagggcctggacccagtggggatcctgcaagaaagagagtacaggttg
caggctcgcattgcacatcgaatccaggaactggaaagtttgccaggctcacttcccccc
gacctgaggactaaagccacagtggagctcaaggcactgcgtctacttaacttccagcgg
cagctgagacaggacgtggtggcatgcatgaggcgagacacgacgctggagacagccctc
aactccaaggcttacagacgcagcaagcggcagacgctgagagaggcccgcatgaccgag
aagctagagaaacagcagaagcttgagcaggagaagaagcgcagacaaaaacatcaggaa
tatctcaacagtatccttcagcacgctaaagacttcaaggagtatcaccgctcagtgtcc
gggaaaatgcagaaactcaccagagctatcgccacctggcacaccaacacggagagggaa
cagaagaaggagactgagagaattgagaaggagaggatgaggagactgatggcggaagat
gaggaaggttacagaaaactcattgaccaaaagaaagacaagcgtctggcctatttgctg
cagcagacggatgaatatgtggccaacctcaccaccctggttcacgaacacaaagctgcc
caggctgccaaggagaagaagaagaggaagaagaaaaagaagagggtggatggagatggc
gaaggccccagtgccattggacctgacggagagcccatggatgagagcagccaaatgagc
gagctgccagtcaaagtgattcagacagagactggcaaagttttgcagggaaccgatgct
cccaaatccagccagctggaggcctggctcgagatgaaccctgggtatgaagtcgcccca
cggtcagacagcgaggagagtggctcagagtttgaggaggaggaggaagaggaaggggcc
aaagcagaaccagaggaaaagaagataatcgacgatgaagacgcagttcagcaggcggac
accaagcacattatcgagtcagcaaagcaggacgtggatgatgagtacagtgttcccact
ggacaaaccagctcccagtcctactatggtgtggcccatgctgtcattgaaagggtggag
aagcagtcgtcgctgctggtcaacggcacactcaaacattaccagatccaggggctggag
tggatggtgtccctttacaacaacaatctgaatggcatcctggctgatgaaatgggcctc
ggaaaaaccatccaaaccatcgccctaatcacctaccttatggagcacaagaggatcaac
ggtccctttctcatcattgtccctctttcgactttgtctaactgggtctatgaacttgac
aagtgggcaccctctgtggtcaaaattgcttataagggcacccccgtgttgcggcgtggg
ctggtgcctcaactccgcagtgggaagttcaacgtcttgctgaccacctatgagtacatc
atcaaggacaagcacatactggcgaagattcgttggaagtacatgattgtggacgagggt
caccgcatgaagaaccaccactgtaagctgacccaggtgttgaacacccactatgtggct
cctcgccgcctcctcctcaccggcacgccactgcagaacaagctgcccgagctgtgggcg
ctgctcaacttcctcctgcccaccatctttaagagctgcaccaccttcgagcagtggttc
aacgcgccgttcgccatgacaggagagagggtggacctgaatgaggaggagaccatcctg
attatccggcgtttgcataaggtgctccgccccttcctgctacgcagactgaagaaagag
gtggagtctcagctgccagagaaggtggagtacgtggtgaaatgtgacatgtctgccata
cagaaggttctgtaccgccacatgcagaaaggcatcctcctcactgacggctcagagaaa
gataagaagggtaaaggaggagcaaagaccctgatgaacaccatcatgcagctgaagaag
atctgcaaccatccctacatgttccagcacatcgaggaatcttttgccgagcacttgggc
tttcctaacggcttcatcagtgggcttgatctgtatcgagcctctgggaagtttgagctc
ctggatcgaatcctgccgaagctgcaggccaccaatcacagagtcctgctgttctgccaa
atgaccactctcatgacaatcatggaggactacttcagctatcgtaactttcagtattta
cgtcttgacggaaccaccaaatccgaggaccgagcagcactgctgaagaaatttaacgag
gaaggatctcagtacttcatcttcctgctcagtaccagagctggcggcctcggcctcaac
ctgcaggctgcagacactgtcgtcatctttgacagtgactggaacccacaccaggacctt
caggctcaggaccgggctcaccgcatcggtcagcagaacgaagtgcgtgtgcttcgtctc
tgcaccgtcaacagtgtggaggagaaaatcttggcagctgccaaatacaaactcaacgtg
gatcagaaggtcatccaggcgggcatgttcgaccagaagtcgtcgagtcacgagcgtcgt
gccttcctccaggccattttagaaaccgaggagcagaatgaggaagaagatgagataccc
gatgatgaaactcttaaccagatgatagcccgcaatgaggatgaatttgagctctttatg
cgtatggacatggacagacgccgggaggacgccaggaatccgaagcgtaagcctcgtctc
atggaggaggacgagctgccttcttggatcatcaaagacgaagctgaggtcgaacgtctc
acatatgaagaggaggaggagaagatgttcggacggggatcacgctgtcgtcgtgacgtg
gactacagcgacacgctgactgaaaaacagtggctgcgggctatcgaggatggaaaccta
gaggagatggaggaagagatccggctgaagaagcgtaaacgcaagagacgtcaggacaag
gactcgtcaagcagagacgacggaggctccaaggccaagaagaaacgcggacgtccacca
gctgagaaactctcccccaaccccccgaaactcaccaagcaaatgaacaccatcatcgat
acggtcatcaactacagagacgggtcaggaagacaactaagcgaggtgtttgttcagtta
ccatccaggaaggagctccccgaatattacgagctgatcagaaaacctgtggacttcaaa
aagatcaaggaccgtgtgagaagccataagtacagaggtgtgggagacttggagagggac
gtgatgctgctttgtcacaacgcccagaccttcaacctggagggatcccagatatacgag
gactccatcgtccttcagtctgtcttcaagagtgccagacagaagattgcaaaggatgaa
gagagtgaagatgacagcgatgaggatgacgaggacgaggacgagtcagaggccgaggcc
aagtctgtgcgggttaagatcaagctgagtaaagaggcgcgcagtcaggacaaaggcaag
aagaggcaaagccgggggaaggccaagccggttgtcagtgacgacgacagcgacgatgac
ctggatgacaatgatcagtcggacaagagcgacgacgagtga
DBGET
integrated database retrieval system
