Plectropomus leopardus (leopard coralgrouper): 121945033
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Entry
121945033 CDS
T07454
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03013
Nucleocytoplasmic transport
plep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121945033 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
121945033 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121945033 (thoc5)
03041 Spliceosome [BR:
plep03041
]
121945033 (thoc5)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121945033 (thoc5)
Spliceosome [BR:
plep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121945033 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
121945033
NCBI-ProteinID:
XP_042344965
LinkDB
All DBs
Position
6:complement(17613255..17623329)
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AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVLRSEGGTPETKRGRGEGEPQDVRVYSEEVELDGRDPEQDFLQYKESC
ESLATLMSEIQELKASGAKEGCAEIEQRRMQSCIHFMNLKKLNRLAHMRLKKGRDQTHEA
KQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYQEAPQEISRPRLT
KNDPHQLTLARLDWELEQRKRLAEKYKESQATKEKIQKSIEVKKEHLTSLQPGLNAIMQA
SLPVQEYLSMPFEQTQIQTEIARHLPPPLYVLFVQANAYGQACDKNLNVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDEKRREMLKRHPLSLCLDLKCKDGS
ILHLSFYYLMNLNIMTVKTKVSTSTDLNTAISAGDLLKSDTLLSCLYTSDQGRETPNPAN
RYQFDKVGIVSFADYVDELGHSYMWVQSLGGLHFPKDASGGVHVGSSLSASHMESTMKLL
RGRLQSRLALHKQFASLEHSMIPVSSECQHLFPAKIISRLARWTTITQQEYLELPYTRHV
TDAGLAKETDLYFMAVVERGTARLQAAVVLSPRYPEISPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQLSRLCVCLDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggacgccctaaagaagcgaaagtcgaaggtactccgcagtgaaggaggaacc
cccgagacgaagcgaggtcgcggagagggggagccgcaggatgtgcgtgtatatagtgag
gaggtggagctggacggcagggaccctgagcaggacttcctgcagtacaaagagtcatgt
gagagtttggccacactcatgagtgagatccaggagctgaaagccagtggagccaaggag
ggatgtgcagagatcgagcagagacgtatgcagagctgcatccacttcatgaatctgaaa
aagctcaatcgtctggctcatatgcggctcaagaaaggcagagaccagacgcacgaggca
aagcagagagtggatgtgctgcaccttcagttacagaacctgctgtatgaagttatgcat
cttcagaaggagatcagcaagtgtttggagttcaagtctaagcatgaggagatagacttg
gtgtctgaggaggagttttaccaggaggcaccgcaggaaatttccaggcctcgcctcaca
aaaaatgatccccaccaactcacgctggcacgattagactgggagctcgagcagaggaag
aggttggcagagaaatacaaggagtcacaggccacaaaggagaagatccagaagagcatt
gaggtgaagaaggaacatttgacaagcttgcagccgggactcaatgcaatcatgcaggcc
tctctcccagtgcaggagtatctgtccatgccttttgaacaaactcagatacagacagag
attgcccgccatctgccgccacctctctatgtcctgtttgttcaagccaatgcctatggc
caggcctgtgacaagaacctgaatgtctcaatcagtggtgatgtggatgaagccaaggcc
ctttccaaacctccagaagactcccaggatgatgagagtgactcagatgcagaggaggag
caagagaaaacgaagaggcgaaggccaactacaggcggccagctggatgagaagagacgg
gagatgctgaaaaggcaccctctgtccctctgcttagacctcaagtgtaaagatggcagc
atcctccatctcagcttctactacctgatgaatctgaacatcatgacagtgaagaccaag
gtctccacatccacagacctcaacacagccatcagtgcaggggacctgctgaagtcagac
actctgctcagctgtctctacaccagcgaccagggacgagaaacacccaatccagctaat
cgctaccagtttgataaagtcgggattgtttcctttgctgattatgttgacgagttgggc
cactcctacatgtgggttcagagtctaggaggactgcattttccgaaagatgcttcaggg
ggtgtgcatgtgggcagctctctgagtgccagccacatggagagcaccatgaagctgctg
agaggacgacttcagtcccgcctggctttgcacaaacagtttgcctctttagagcacagc
atgatccccgtctccagtgagtgtcagcacctctttcctgccaagatcatctcccgttta
gctcgctggaccacgatcactcagcaggagtacctggaactgccatacactcgccatgtg
actgatgctgggctggcaaaggagacggatctgtacttcatggccgtggtggaaaggggc
acagctcgtctccaggccgctgtggtgctgagtccccgttacccagaaatctctcctctc
ttctccctctccctcagctggaagggagagcgcagtggacgcactgatgacaacctacga
gccatggagagcgaggtcaatgtgttcaaaaatgaactacaggggccacgcccaggacac
cagctcctcaccaatcagctttcacgcctgtgtgtctgcctggatgtgtatttggagact
gaaggacaagatgacagcgtggagggaccacgagaatttcccagagaaaagatgtgcctg
cgcactgtccggggtccaaatcgtctgaagccatttaagtacaaccaccctcagggtttc
ttcagtcaccgctag
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