Plectropomus leopardus (leopard coralgrouper): 121945044
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Entry
121945044 CDS
T07454
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121945044 (hnf1a)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121945044 (hnf1a)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
HTH_5
Motif
Other DBs
NCBI-GeneID:
121945044
NCBI-ProteinID:
XP_042344978
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Position
6:9459030..9467146
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AA seq
583 aa
AA seq
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MEERLEERAVAAKWKSSRLTALQEQLIWALLGSGLSRDVLIQAIGELERDRASAGAERGE
RGDGESSEEGEMDFPPPIFRELEKLPPEELAKLRAEVDRLLQEDPWHVAKMIKSYMQQHN
LPQREVVESTGLNQSHLSQHLNKGTPMKNQKRASLYTWYVKKQCEISQQFTNAKHGLASA
EEPGEETRKGRRNRFKWGPASLQILFHAYERQKNPSKEEREGLVEDCNSLGSLDYNAKGA
TPCSSSLRAECHQRGVSPSQLAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPFTSQ
STSSSHPNLPPSPEQGVKYSQQILCDTVSSARGSGGERVGRLVVSPIQLEPSHTLLETHN
PKLVSSGGPLPPVSTLTSLHSLSASPASSQGLIMASLPSVMSLGESSLLIGLASTQPQTV
PVINNVGGGFTTLQPISFPQQLQASPQQPISHQLQSHMGASPFMATMAQLPCHMYNKSDS
PQYHSSSLLSQAMVITDSSSLGTLTSLTAVRQILTADPEEQTEPPLQEESLHLQPHTPVP
VSSESLELYPASQTTESHQSHLLSPSPTDISSYIPTQMVSTAQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaggttagaggagagggccgtggcggccaagtggaagtcgagtcgtttgact
gcccttcaggagcagctgatctgggccctgctggggtctggactgtcccgggacgtcctg
atccaagccataggggagctggagcgagacagggcgagtgctggcgccgagaggggagag
aggggggatggcgagagctcagaggaaggagagatggatttcccaccgcctatattccga
gagctggagaagcttcccccggaggaattggccaaactgagggctgaagttgaccggcta
ctgcaggaggacccctggcatgttgccaaaatgataaaaagctacatgcaacaacacaac
ctccctcaaagagaggtggtggagtccacaggactcaaccagtcccatctctcccagcac
ctcaacaaaggcacacccatgaagaaccagaagagggcctctctgtacacctggtacgtc
aagaagcaatgcgagatcagccagcaatttaccaacgccaaacatggccttgcatcagcg
gaggagccaggagaggagaccaggaaagggcggaggaaccggttcaagtggggcccagcg
tccttgcagatcctctttcacgcctacgagcgacagaagaaccccagcaaggaggagaga
gagggcttagtggaggactgtaacagtttaggtagtcttgactacaacgccaaaggtgcc
acaccctgctcttcctccctcagggcagagtgccatcagaggggcgtgtctccatcccag
ctcgctggcctgggctccaacctggttactgaggtccgcgtttacaactggttcgccaat
cgccgcaaagaggaggccttccgtcacaaactggctctggatacaccttttaccagccaa
tcaacctcctcttctcaccccaacctcccacccagtcctgagcaaggtgtgaagtacagc
cagcaaatcctgtgtgacaccgtgagctcagcccgcggaagcggaggggagagagtgggg
cgtctggtggtcagccctatccaactggagcccagccacacactcctcgagacacataac
cccaagctggtgtccagcggtggcccactgcccccagtaagcactctgacctccctgcac
agcctgtctgcctcccccgcttcctcacagggcctcatcatggcctcactgcccagcgtc
atgagcctgggggagtcctcacttctcattggtttagcctccacgcagcctcaaaccgtg
ccggtcatcaacaatgtgggcggcggtttcaccactctccagccaatctcctttccgcag
cagctccaggcatctccccagcaaccaatatcccaccagctccagagtcacatgggagcc
agtcccttcatggcgaccatggcgcagctgccatgtcacatgtacaacaagtcggactcg
cctcagtaccattcgtccagtctgctgtctcaagccatggtcatcactgacagcagcagc
ctggggacgctcaccagcctcaccgctgtcagacagattctaacagcagatcctgaggaa
cagacagagccacctttacaagaagaatctctacacctgcagccgcacacacctgtacca
gtttcctccgagagcctcgagctgtatcctgcgtctcagacgacagaaagccatcagtct
cacctcctctcaccttcaccaacagacatcagctcctacatccctacacaaatggtctct
accgcgcagtag
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