Plectropomus leopardus (leopard coralgrouper): 121945299
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Entry
121945299 CDS
T07454
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121945299
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plep01009
]
121945299
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plep04515
]
121945299
Protein phosphatases and associated proteins [BR:
plep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121945299
Cell adhesion molecules [BR:
plep04515
]
Cadherins
Protocadherins
121945299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
121945299
NCBI-ProteinID:
XP_042345357
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All DBs
Position
1:complement(12740056..12743462)
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AA seq
889 aa
AA seq
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MFSSRHLSLRKRGGIWGLCFLLLYTSPLSCFANYSHAKQLIYKIKEELPRGTFIGAIGVD
LNLDFTVEPPFLFNLPQKKVSGQYVNLNNTTGELYTSATEIDRETLCPDNSQGQGCVLSL
DVFVLPQQYFQLVKVKIFIEDVNDNRPKFPVDEICMSVPENTPINARYAVEQSAVDPDLG
LYGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVTESLDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFTESQINVTLHGNTTKETHLARLHAFDPDLGANAQISYAYS
ERVPRDTRSLFHLDRITGVIKLVGKIDTGTASFYKLTILANGPGCIPAVATVSVHIIKVV
TGPPAVIPRYIAPEKDGVVTIKESEPAFSPIAFFTVKNIGMNQRVDCHLEGSGPFRLGPY
QLFKNEYLLETTEPLDYEKTQEYELIVVAKNARDVVIKTFLKVQVLDENDNAPVFQQSLV
EISVEENNPPNTFLTQLQATDQDSEKRGEVIYLLGGDAPGIFIVDRVTGVLTVTTSLDRE
EKETYRFIVRAVDQGTPRRESIATVVVCVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAVDGGEP
ALSCVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTLPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPETGNITLRRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTREAEIEVEERPWYKGQMTEGPERYELLPCQPVLIALSVTCLGLF
FTVVMLTSYICCQRFKKQRKKRSDVEIPLKMKNDSMQVVNRKLRQISNI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcagcagacacctcagccttagaaaaagaggaggaatatggggattgtgcttc
ctcttgctttacaccagccctctctcctgttttgcaaattacagccacgcaaaacaactg
atctataagataaaggaggaattacccagagggacatttataggggccattggagtagac
ctaaatctggatttcactgtggagcccccctttttgttcaatctcccgcaaaagaaggtc
agcggacagtatgtgaacctaaataataccacaggggagctttacacatctgctacggag
attgacagggagaccctctgtcctgataactcacagggacagggctgtgtcctctcgctg
gatgtgtttgtgttgcctcagcagtactttcagctcgtcaaagtaaagatctttatcgag
gatgtgaatgacaacaggccaaagttccctgtggatgagatctgtatgtcagtcccagaa
aacacacccatcaatgcacgttatgcggtggagcagtcagcagtcgacccagacctgggt
ctttatggcgtgcagacctactggcttgttaatgactttggcatgttcacactggacgtt
gaggagaatgagggaggtgagcttacacccttcctcattgtgacagagagtttggacaga
gagacccaggctgaatacattacagacatcatcgcagaggatggagggacccctcctctg
ctcggagcggctactttaaaaattgtcatcacagatgtgaatgataactgcccccaattc
acagagtcacaaattaatgtcactctgcatgggaatacgaccaaagagacacatttggca
cgtctgcatgcttttgaccctgaccttggtgctaatgctcagatcagctatgcttacagt
gaacgtgtgccaagggacaccaggagcttgttccatttggacagaatcacaggggtgatc
aagctagtggggaaaatagacactggcacagcttcattttacaaactcaccattctggcc
aatggacctggttgtatccctgcagttgccactgtttctgttcatatcatcaaagttgtt
actggacctcctgctgtcattccccgatacattgccccagaaaaggatggggtggtgaca
ataaaagagtcagagccagcgttttctccaattgctttttttactgtcaaaaacattggc
atgaaccaaagggtggactgtcatctggaagggagtggcccgttcagactcggcccctat
cagctgttcaagaatgaatacctgctggagacaacggagcctttggattatgagaagaca
caggagtacgagctaattgtggttgctaagaatgcccgagatgttgtcattaaaaccttt
ctaaaggtgcaagttttggacgagaacgataacgcaccagtatttcagcagtctttggtg
gaaatatctgtggaggagaacaatccgccaaatacctttctgacccagctccaagccaca
gaccaggacagtgaaaaaagaggggaggtaatctatctcctcggaggtgatgctccaggt
atcttcattgtggatcgtgtcactggtgtcctgaccgtgaccacatcgctggaccgtgag
gaaaaggagacgtaccggttcatagtgagagcagtggaccaggggacacccaggagggag
tcaattgcgactgtggtggtgtgcgtgcaagaccgcaatgacaatagtccacgcttcatc
aataaggacttcacgttctttgtgccggagaacttcccagggtacggcgaaattggggtc
ctctctgtaacggatgccgacgctggggagaatggttgggtggcgctttccatcctcaat
ggcagtgacatcttcatgatagacacaggccgaggggcgctgagggccaagacgtcactg
gaccgtgagcaacaagggacataccagctgtggattgaggccgtcgatggcggggagcct
gctctttcctgtgttactatggtgactgtgctgttgttggatgtaaatgacaacccgcct
attgtcctttttccccagtccaatcagtcttacatgctggtactacccaatacattacct
ggaacatcaatcacagaggtctacgctgtggataaggatacaggcatgaatgccgtgatt
gcctatagtatcattaagagaaaaggtggcgagccagggtcattcgccattgacccagaa
acaggaaatatcacgttaaggagggagctcagcaaccggggcctctacagccttctggtg
aaggtcagtgatcacggtcagcctgagccgctttactcaacagtcatggttaacttcttt
gtaaatgaaactgtgagcaatgagagctacatccaaagcctgctgaccagagaggctgag
atcgaggtagaggagaggccatggtacaaaggccagatgacagagggacctgagaggtat
gagttgctcccctgtcagcccgtcctcattgctctgtcagtgacatgtctagggctgttc
ttcacagttgttatgctgacatcttacatatgctgccagagatttaagaagcagcgaaag
aaaagatctgatgtggaaatacctttaaaaatgaagaatgactcaatgcaggttgtgaac
agaaagctcaggcagatctcaaacatctga
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