Plectropomus leopardus (leopard coralgrouper): 121945389
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Entry
121945389 CDS
T07454
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03320
PPAR signaling pathway
plep04148
Efferocytosis
plep04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121945389 (rxrbb)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121945389 (rxrbb)
03320 PPAR signaling pathway
121945389 (rxrbb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121945389 (rxrbb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plep03310
]
121945389 (rxrbb)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121945389 (rxrbb)
Nuclear receptors [BR:
plep03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
121945389 (rxrbb)
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Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
121945389
NCBI-ProteinID:
XP_042345473
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Position
7:17454180..17463852
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AA seq
444 aa
AA seq
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MSSQQPNSSASNSPTNVLGSPFSVISPSLNPQVVSPSLGFGPISNSQISSSAPISGMHSI
SSSEDIKPPFGLRPMPAHSPGIMLSQKRMCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVIKHVKWIKEDGKDEGWMTVQE
ERQRNREREGELEFSVGVNEEMPVEKILEAETAVEQKTELHSDGGSAGNSPHDAVTNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIALKDGVLLASEL
QRDSVHSAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNP
DAKGLSNTGEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacagcagcccaacagctcagcctccaacagccccaccaacgtcttgggttct
cctttctcagtcatcagtccctcactcaatcctcaggtggtctcaccttctctgggattt
ggacccatcagcaacagtcagatctcttcttcagcacccatatcagggatgcattcaatc
agcagctcagaggatatcaagcctccatttggcctgaggcccatgccagctcacagccct
ggaataatgttgtctcagaaacgcatgtgtgtcatctgtggagaccgctcttcaggcaag
cactatggagtgtacagctgtgagggctgcaaaggtttcttcaaaagaactgtgcgcaaa
gaccttagctatacctgcagagataacaaagagtgcctggttgacaaacgccagcgcaat
cgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagagggaagtgatc
aaacatgtaaagtggataaaagaagatggaaaagatgagggatggatgacggtccaggag
gagcgccagaggaaccgtgagcgtgaaggagagctggagttcagtgtcggagtgaatgag
gagatgcccgtggagaagattttagaggcagagacggctgtggagcagaagactgagctg
cactctgatggtggttctgcaggcaactccccccatgatgcagtcaccaacatctgtcag
actgcagacaaacagctgtttgccctggtggagtgggcaaagagaatccctcatttctct
gaactgcccctcgatgaccaggtcatcctcctgcgagcaggttggaatgagctcctcatc
gcctcgttctcccatcgctccattgctttgaaggatggcgttcttctggcttctgagctg
cagcgcgacagtgtacacagtgcaggagtcggggccatttttgacagggagagtgtgcag
agtgcagaggtcggcgccatatttgacagggttcttacggagctcgtcaacaaaatgaga
gatatgcaaatggacaaaacagagctgggctgcctccgagccatcgtcctgttcaatcca
gatgctaaagggctctccaacactggtgaggtagagctccttagagaaaaggtctatgca
tcattggaagcctactgcaaacagaaatacccagagcagcagggaaggtttgcaaagctc
cttcttcgactgccggcactgcgatccattggcttgaagtgcttggagcatctcttcttc
tttaagctgatcggtgacacacctattgacactttccttatggaaatgcttgaagctccc
catcagttgtcttag
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