Plectropomus leopardus (leopard coralgrouper): 121945485
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Entry
121945485 CDS
T07454
Name
(RefSeq) syndecan-2-like
KO
K16336
syndecan 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04514
Cell adhesion molecules
plep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121945485
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121945485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
plep04090
]
121945485
00535 Proteoglycans [BR:
plep00535
]
121945485
CD molecules [BR:
plep04090
]
Proteins
121945485
Proteoglycans [BR:
plep00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
121945485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
DUF1180
MbhD
BAMBI_C
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
121945485
NCBI-ProteinID:
XP_042345619
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All DBs
Position
7:15299832..15310784
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AA seq
281 aa
AA seq
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MRNLRLLFLVGLATGFISEKLFVSSQTPSSTTDDLYIEGHTSGGLPIDDEDGDVDGSGSG
SGDYDVTYKEEIVRRILNISQTTVSKEMVPTQSQPTATSPQNPSTTAADSQDPSTTVEED
TETPFVLPKGNDEEVAGPTADWFTESTRPSSTSEPSETTELGMDITVNKDTEEDNSLVST
PKNRKDEVEEVDNELLEKNGRGSIIYEMDSPEEVTSENMWERTEVLAAVIACGVVGFLCA
VFLLLLLAYRMKKKDEGSYDLGDTKVSTTAYHKAPTKEFYA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatctgcggttgttgtttctcgtcgggctggcgactggctttatcagtgaaaaa
ctttttgtgtcctcccagacaccctcttccacgacagacgacttgtatatagagggccac
acgtcaggtggcctcccgatagatgacgaagatggtgatgttgatggctcaggctctgga
tccggagactatgacgtcacgtataaagaagagatagtcaggaggatcctcaacatctct
cagaccacagtctccaaagaaatggttcctactcaatcgcagccaacagcaacctctcct
caaaacccatcaaccacagcagcagacagccaggatccatcaaccacagtggaggaggac
acagagacaccgtttgtattacctaaaggcaatgatgaggaggtggcaggcccaacagct
gattggttcacagagagtacccgtcccagctccactagcgagccaagtgaaacaactgaa
ttgggcatggacatcaccgtaaacaaagacaccgaagaggacaacagtctggtgtcgaca
cccaaaaaccggaaagatgaagtcgaggaggttgacaatgaacttctggagaaaaatggc
agaggcagcataatatatgagatggactcccctgaagaggtgacctctgagaacatgtgg
gagaggacagaagtgctggcagcggtgatagcgtgcggagtggtcggattcctctgtgct
gttttcctcctcctcctccttgcataccgtatgaagaagaaggacgaaggtagctacgac
ctgggagacaccaaagtttccacaacagcctatcacaaagcgcctaccaaggagttctac
gcctaa
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