Plectropomus leopardus (leopard coralgrouper): 121945500
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Entry
121945500 CDS
T07454
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plep03016
]
121945500 (cdkal1)
Enzymes [BR:
plep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
121945500 (cdkal1)
Transfer RNA biogenesis [BR:
plep03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
121945500 (cdkal1)
Prokaryotic type
Methylthiotransferases
121945500 (cdkal1)
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
121945500
NCBI-ProteinID:
XP_042345640
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Position
7:complement(14338026..14608484)
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AA seq
565 aa
AA seq
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MPSACDSLIEDIEDMVSSSDPTPQERQSARKSIIPRSRRKKELLSQEELQADSVIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPTDADLWVLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFKKVVDFLKERVPGVTIATDLICG
FPGETEEDFQETVDLVKLYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSQLFH
SYNPYDHKVGERQHVLVTEESFDAQYYVAHNKFYEQVLVPKRAEFKGKMIEVDIYEAGKH
FLKGHPVEDSKPFTPSIAAPLQKGEVSGLMQEKMSNGVQGPASSEPASSVLLFRSHSLDR
ETVKKLGIGLTLAAAILAFLIEKLY
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgcctgtgactctctgattgaggacattgaggacatggtgtcctctagcgac
cccactcctcaggagagacagtctgccagaaagagtatcataccgaggtccaggaggaaa
aaagaacttctgagccaggaggagctccaagctgacagtgtgatccctggcacccaaaaa
atctggatgaaaacgtggggctgtagccataacaactcagatggagaatacatggccgga
cagctagctgccagcggatacaagatgactgatgacccaacagatgcagacctttgggtg
ctcaacagctgcactgtgaaaaaccctgcagaggaccacttcagaaactcaatcaaaaaa
gcccaggaacagcagaaaaaggtggtagtagcaggttgcgttccccaggctcagccacgg
atggactacctcaaaggactcagcatcattggggtccaacagattgatcgagtggtggaa
gtagtggacgaggccgttaaaggccactcagtccgactgttgggtcagaagaaagatgga
ggccggaggcttggaggagctagactggacctgcccaaaatcaggaaaaaccctctcatt
gaaatcatctccattaacaccgggtgtctgaatgcatgtacctactgcaagacaaagcat
gccagaggagacctggctagctatcccattgaggaactagtggagagagccagacagtct
ttccaggagggagtgtgtgagatctggttgaccagcgaagacacaggagcttatggcaga
gacatagggacagacctgcccacattactgtggagattggtggaggagattcctgaagga
gccatgctgaggctgggtatgaccaaccctccatatatcctggaacacctagaggaaatg
gccaagatattgaatcatccacgcgtctacgctttccttcatgttcctgtgcagtcggcc
tcagacagcgtcctgatggacatgaagagagagtattgcatagacgacttcaaaaaagtg
gtggacttccttaaagagagggtcccaggtgtgaccattgctacagatttaatctgcggt
tttcccggtgagacggaggaagacttccaagagacagtagacttggtgaaactgtacaga
ttcccaagtctcttcatcaaccagttctatcccagacccggtacacctgccgctaagatg
gagcaagtaccagcacatgtgaagaagcagaggactaaagagctgtcacaactcttccac
tcatacaacccatacgaccacaaggtcggggagaggcaacatgttttggtgacagaggag
tcatttgatgcccaatactatgtggctcataacaagttctacgaacaggtgctggtgcct
aaaagggctgagttcaaagggaagatgattgaggtggacatctacgaggcaggaaaacac
ttcctgaaaggccatcctgtagaagacagtaagcctttcactccctcgattgctgcaccg
cttcagaaaggagaggtgtctggcctgatgcaggaaaagatgtccaatggcgtccaaggt
ccagcttcctctgagcctgcttcgtctgttttgttgttccgctctcacagtctggacagg
gaaacagtgaagaagctgggaatcgggctcactctggcagcagctatcttggcctttctt
atagagaaactgtactga
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