Plectropomus leopardus (leopard coralgrouper): 121945809
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Entry
121945809 CDS
T07454
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121945809 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121945809 (cnot3a)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121945809 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121945809 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
DUF4407
Motif
Other DBs
NCBI-GeneID:
121945809
NCBI-ProteinID:
XP_042346085
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All DBs
Position
7:complement(25762032..25778886)
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AA seq
913 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIDELKRLIERHRFHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNVEDEMYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQSP
VKNGTPSLLSSFSSSTTSGSSSSSSLVSMASVVGGIPVVPTSSSLIGSFSSAVQQHQHQP
VQQQQQPQPPNQPQQQQQQQPPQTKPSVPSNNTPSPPSNPLLPASTAPSLPTPSTPSSSA
PNSQSQLTSVPTPASSLGLGLGLGLSKIGLTGTSSANQMSGLGLGGHPSPLNTMAGLISG
STPAPYAQAAASGGLGLSSTTQSSISVESSTSIPTSGSSGVTTNGAGIGLGLLGSSPAHS
SLSGSMLGLVPGQNVAPGASQVPPSPVSTTPGVVGMMGGNGGNVGVVGGVGVNAAPARPP
SGLKQNGSTSYSAVVAESSTESALSTPSQSQSSQPSSLSSSTSQPMDNGPSLISSITLPP
SSPSPSFSDSTPGGGSLLNGPHSYTQASEVLKAPEPLSSLKVMAERAALGSGLDGEIPNL
HLTDRGRNDIFSGSSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQES
AWTHMPHPSDSERIRQYLMRNPCPTLPFHHQIPPHHSDSIEFYQRLSTETLFFIFYYLEG
TKAQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGF
TFEYRYLEDRDLQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaactacaaggtgagatcgatagatgtttgaaaaaagtagctgaa
ggtgtagaacagtttgaagacatctggcaaaagcttcacaatgcagccaatgcaaatcag
aaggaaaaatatgaggctgacctcaagaaagagattaaaaaactacagcgattgagagat
cagataaaaacatgggtggcctcaaacgagatcaaagacaaaaggcagctagtcgagaac
cgcaaactcatagagacgcaaatggagcggttcaaggtagtggaacgtgagacaaaaaca
aaagcctactctaaagaaggcttggggctcgctcagaaggtggatccagctcagagggaa
aaagaagaaacgggacagtggctaacaaatacgatagacactctaaatatgcaggtggat
cagtttgaaagtgaagtggaatctctctcagttcagacaagaaagaagaagggcgataaa
gataagcaagatcgtattgacgagctcaagcgattgatcgagaggcatcgatttcacatt
cgcatgttggagaccattttacgaatgcttgataatgactcagtaccagtggatgcaatc
cagaaaatcaaggatgatgttgaatactacattgattcctcccaagacccggactttgag
gagaacgagttcttgtatgacgacttagacctggaagacatccctgcagcattagttgca
acttctccatcaggtcagggcaatgttgaggatgagatgtatctccactccagcagcact
cccacttccacaacctcctcttcacccattcctccatccccggccacatgcactgctgag
aactcagaggacgataagaaaaggggacgatcgacagacagtgaagttagtcagtcacct
gtgaagaacgggaccccatccttgctatcttccttctcctcctccaccacctctgggtcc
tcctcatcctcctctctcgtgtccatggcgagtgttgtcggaggcattcccgtggttccc
acaagcagcagtcttatagggagcttcagcagtgcggtgcagcaacatcagcatcaacct
gtgcaacagcagcaacaacctcagccaccaaaccaaccgcagcagcaacaacagcagcag
ccacctcagacaaaaccctctgtcccctcaaacaacacccccagcccgcccagcaaccct
ctactcccagcctcaactgcaccctctctccccacacccagcacacccagctcatctgca
cccaactctcagtctcagctaacatctgtccccaccccggcatccagtttgggactcggg
ctggggctgggattgagcaaaattggcttgacagggaccagcagtgccaaccagatgtct
ggtttgggtctgggtggccacccctctcctttaaacacaatggcagggctcatttcaggc
tccacacctgccccttacgctcaggcagcagcatcaggaggcctgggtttaagcagcacc
acccagtccagcatttcagtagagagcagcacttccatccccacctctggctccagtgga
gtcaccaccaatggggcggggatagggctcggtttgctaggatccagcccagcccacagc
tctttgagtgggagtatgctgggtcttgttcctgggcaaaatgtagcccctggcgcctct
caggtgcccccgagtcctgtcagcactacccctggagtggttggcatgatgggaggcaat
ggagggaatgttggcgtggttggaggagtaggggtgaatgctgctcctgccagaccacca
agtggactgaagcaaaatggaagcacaagttacagtgctgtagtggcagagagctccaca
gaatcagctctaagcacaccgagccagtcacaaagcagccaaccctcgtctctcagttct
tcaaccagtcagccgatggataatggtcccagtttaatcagctccatcaccctgcctccc
agctctccgtccccctcgttctcagacagcacacctggaggagggagtcttctcaacggg
ccccactcttacacacaggcctctgaggtgctcaaggcccctgagcctctcagttctctg
aaggtgatggcagagagagcagcgctgggatcaggtctggatggagagattcccaacctg
cacctaacagacagaggtcggaatgatatcttttctggttcatctgcagcgcctggcaca
cctgccgcccctcagccgtccgtgtcggaagtcagcatccccccctcgcttggggtctgt
ccacttggccccacccctctccccaaagaccagctctaccagcaggccatgcaggaatct
gcatggacacacatgccgcacccctccgactctgagaggatcaggcaatacctgatgagg
aatccgtgtcccaccttgcccttccatcatcagataccgccgcaccactctgactccata
gagttctaccagagactgtccacagaaaccctctttttcatcttctactatttggaggga
accaaggctcagtatttgtccgccaaggctctgaagaaacagtcgtggagatttcacacc
aagtacatgatgtggttccagaggcacgaggagcctaagaccatcactgacgagtttgaa
cagggcacttacatttattttgactatgagaaatggggccagaggaagaaggaggggttt
acctttgagtacaggtacctcgaagaccgagacctgcagtga
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