Plectropomus leopardus (leopard coralgrouper): 121945836
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Entry
121945836 CDS
T07454
Symbol
smg5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121945836 (smg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121945836 (smg5)
03032 DNA replication proteins [BR:
plep03032
]
121945836 (smg5)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
121945836 (smg5)
mRNA cycle factors
Common to processing body (P body) and stress granule
121945836 (smg5)
DNA replication proteins [BR:
plep03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
121945836 (smg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
121945836
NCBI-ProteinID:
XP_042346117
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All DBs
Position
7:complement(30131820..30154819)
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AA seq
1125 aa
AA seq
DB search
MSGPGQDSEPEAKVLLIKRLYRAVVESVHKLDVIIGSKASYREVFKPENISLRNKLRELC
VKLMFLHPVDYGRKAEELLWRKVYYEVIQVIKTNKKHIHSRSALECAYRTHLIAGVGFYQ
HLLLYIQSHYQLELQDCIDWTHVTDPLIGRKKPVSATPKEMEWAQMACHRCLVYLGDLAR
YQNELAGVEAEQLAERFYHQALSVMPHVGMPFNQLGTLAGSKFYNVEATYYYLRCIQSDA
PFEGAYGNLKRLFDKAAKMYHQVKKQEMKKLSPSRQRSKDIKRLLVSFMYLQSLLQPKNS
LMETELTSLCQSVLEDFNLVLFYLPPPTHGGAHHSPSEEEEEQQQQHADSSCPVLPDTLV
FKMVVTCLMVVHSLKRGGSKQYSASIAFTLALFSHLVNHVNIRLQAELEEAESQVPPLHT
DATDDLEMRDSLAPATDRSDEKPLQNGSLEQEEEEEEKDEDGCERVGAKKHCSAEEQRKL
EEEKQRQKKKYTRLSRLRRRRCGRKDTRGEDESDLSEGFESEEDEDEDEERRGHADSTGA
TTTGTPLNPQPVRKETKRDPLGEEGSWGSGSEEEEEEGGTAFDVETDSDMNSQESRSDLE
DIEDTENSDNLEGQAREHQDEEEDEDQPKEEGGDRDGDTPPTTNGPLMPSDSSISSNLQA
MSSQLFQAKRCFRLAPTFSNMLLRPQASSSSGIPTPADASAPPSQETPPPPGDSPCDINP
GTANGTNENDLDSDSEGSQHSTQSEHSEKTLLERLEILTNQGLIQVVKVFVDWLRTNTDI
ILMCAQSSQSLWNRLSVLLNLLPDGSKMLEAELGLNAEVTELLNECEQPGLVQSLLLPED
LALRHLPALSVAHRRLDFTHRNPSLSSLQECVVRVCCIRSFGHFLTNLQGNVLHFNPEAG
IFTSISQSEQDNLVQQAKAQFRMAEEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQS
SMSPYLVPDTAALCQHLNLIRQLAGSGCFIIIIPRTVIDGLDRLKKENAGARDGIRFLES
EFRKGNRYIRCQKESGRSFERDKVKRQDIEAWHLYKMVDSCRQLTVSQSNGDEDTAGMVT
ILTGHQVEELCTQSAAMKSAIQAAGSAGMELKNIVEFYRQWKEIG
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaccgggtcaggacagtgagccagaggccaaagtccttctcatcaagcggctt
tacagggctgtggtggagtctgtgcacaagctggatgtcatcatcggcagcaaagcatcc
tacagagaggtcttcaagccggagaacatcagcctccgcaacaagctgagggagctttgt
gtgaagctgatgttccttcaccctgtcgactacggccgcaaggctgaggagctgctctgg
aggaaggtttactatgaggtcatccaggttatcaagaccaacaagaagcacatccacagc
cgcagcgctctagagtgcgcctaccgtacgcatctaattgcaggtgtgggtttctaccag
cacctgctgctatacatccagtcacattaccagctggagctgcaggactgcatcgactgg
acccacgtcacagacccgcttataggccggaagaaaccggtgtcagccacccccaaggag
atggagtgggcacagatggcctgtcatcgctgtctggtctacctcggagatctagcccgt
tatcaaaacgagctcgctggagtggaggctgaacagctggcagaaaggttttaccatcag
gcgctgtctgtcatgccgcacgtgggaatgccttttaaccaactgggcacactggccggg
agcaagttctacaatgttgaagcaacctactactacctacgctgcatccaatcggacgcc
cccttcgagggcgcctatggcaacctgaagcgcctgtttgacaaagctgccaagatgtac
caccaggtgaagaagcaggaaatgaagaagctgtctccatctcgacaaagatcaaaagat
attaagcgcctccttgtgagcttcatgtaccttcagagcctgctgcagcccaagaacagt
ctgatggagacggagctgacgtcactctgccagtcggtgctggaggacttcaacctggtg
ctgttctacctgccgccgccgacacatggcggtgctcaccactcccccagcgaggaagag
gaggagcagcagcagcagcacgccgacagctcctgccccgtgctgcctgacaccctcgtc
ttcaagatggtggtcacatgtctgatggtggtgcacagcctgaagaggggtgggtcgaag
cagtacagtgcttccatagcttttactctggcgcttttctcccatctggtgaaccacgtc
aacatccgcctgcaggctgagctggaggaagcggagagccaggtgcctccacttcacact
gatgccacagatgacctggagatgagggactcgttggctccagcgacagatcgctcagat
gagaagcctctacagaacggctccctggagcaagaagaggaggaggaggagaaggacgaa
gatggctgcgaaagggtcggcgccaaaaagcactgcagcgcagaagagcagcgcaagttg
gaagaagaaaagcagagacagaagaagaagtacacccgcctctccagactgcgccgacgc
cgctgcggccgcaaagacactcgaggagaggatgaaagcgacctgagcgaaggctttgag
agcgaggaggacgaagatgaagatgaggagaggaggggtcatgctgactcaacaggcgcc
actacgacaggaaccccgctcaatcctcaacctgtcaggaaggagacgaagagggacccc
ctgggtgaggagggcagctgggggagtggctcagaggaagaggaggaggaaggaggaacg
gcattcgatgtagagaccgactcggacatgaacagccaggagtctcgctcagacctggaa
gacatagaggacacggaaaactctgacaacttggagggtcaggcgcgggagcaccaggat
gaagaggaggatgaggatcagcccaaggaagaaggaggcgacagggatggcgatactcct
ccgaccaccaacgggcctctcatgccgagtgactccagcatcagcagcaacctccaggcc
atgtcctcacaactcttccaggcgaaacgctgcttccgcttggcaccaaccttcagcaac
atgttgttgaggcctcaggcctcctcttcctcgggtattcccacccctgctgacgcctct
gctcccccgtcccaggagacaccccctcctcccggagactcaccctgcgatataaacccc
ggtactgccaacggaaccaatgaaaacgacttggactcggattcggaaggcagccaacac
agcactcagtctgaacatagtgagaaaaccctgttagagaggctggagatcctgaccaat
caggggctgatccaggtggtaaaggtctttgtcgactggctaaggacaaacaccgacata
atcctcatgtgcgcacagagttctcagagcctgtggaaccgactgtctgtgctgctcaac
ctgctgccagatggcagtaagatgctcgaggccgagctcggtctcaacgcggaggtgacg
gagctgttaaatgagtgtgagcagcccggtttggtccagagtctgctgctgcctgaggat
ttggctctgcgacacctgcccgctctcagcgtagctcaccgccgtcttgattttactcac
cgcaacccctccctcagctccctacaggagtgtgtggtgcgagtgtgttgcattcgcagt
tttggccacttcctgacgaatctccagggcaacgtgctgcacttcaacccggaggcgggc
atcttcaccagcatcagccaatccgagcaggataatctggtgcagcaggccaaggcccag
ttccgaatggctgaagaggaggcgcgtcgaaatcgcttgatgagggatatggcccagctt
cgactacagttggaggtgtcgcagctagagggcagccttcagcagcctaaggcccagtcg
tccatgtctccctacctggtgccagacacagcggctctctgccagcatctgaacctcatc
cggcagctggccggcagcggctgcttcatcatcatcatcccacggacagtgattgatgga
ctcgacaggttgaagaaggagaatgccggtgcgagggacggcatccgcttcctggagtct
gaatttcgcaaaggcaacaggtacatacgctgccagaaggagtcgggtcgaagttttgaa
agagataaagtgaaacgtcaggacatcgaagcctggcatttatacaagatggtggacagc
tgtcgtcagctgacagtctcccagagcaacggagatgaggacacagccggcatggtgacc
attcttaccggccatcaggtggaagagctttgcactcagtcagcagcaatgaagtcggcg
atccaggcggcgggctcggcgggcatggagctgaagaacatcgtggagttctaccggcag
tggaaggagatcggctga
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integrated database retrieval system
