KEGG   Plectropomus leopardus (leopard coralgrouper): 121946134
Entry
121946134         CDS       T07454                                 
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
plep  Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03013  Nucleocytoplasmic transport
plep04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:plep00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121946134 (seh1l)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    121946134 (seh1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plep03019]
    121946134 (seh1l)
   04131 Membrane trafficking [BR:plep04131]
    121946134 (seh1l)
Messenger RNA biogenesis [BR:plep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121946134 (seh1l)
Membrane trafficking [BR:plep04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    121946134 (seh1l)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WDR55 EIF3I ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 121946134
NCBI-ProteinID: XP_042346513
LinkDB
Position
7:complement(5261987..5270675)
AA seq 415 aa
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MFAVGSDDSNVTYGGKVQIYEYNENTRKYAKAETLMTVTDAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPMRKESTSTGPTKLEVQIVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPLTGSSGQPTAMSTVVGSSVQTSQNALNGMSAGRYFF
PPLDPPRAGTRYGHLLPPSSLIEHCDAEPMQPQQQALSHRRSSRALLTLPEAEGQ
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgtttgtagcgcgtagtatcgcagcagaccacaaagacctaattcacgatgtgtcgtat
gattttcacggccggagaatggcaacttgctccagtgaccaaagtgtcaaggtttgggac
aaaagtgagaatggagaatggcactgcacagccagctggaagacacacagtggatcagtg
tggagagtgacctgggctcatccagaatttgggcaggttctggcctcctgctccttcgac
aggacagctgctgtctgggaagaaattgtaggggagtccaacgataagcagagaggactg
agccactggataaagaggaccacactagtggacagcaggacctcagtgacagatgtgaag
tttgcccctaaacacatgggtctgatgttgaccacttgctctgcggacggagtggtgagg
atctatgaggctcctgatgtgatgaatctgagtcagtggtccctgcagcatgaaatctcc
tgcaagctcagctgcagctgcatctcttggaacccctcaagctctcgtgcccacccacca
atgtttgcagtggggagcgatgacagtaacgtgacgtatggtgggaaagttcagatctat
gagtataacgagaacacaaggaaatatgctaaagcagagacgctgatgactgtaactgat
gcagtccatgacatcgcatttgctccgaacctggggagatcgttccatgtgctcgccatc
gcaacaaaagatgtcaggatcttcaagcttgttcctatgaggaaggaaagcacctctacg
ggacccaccaagttggaggtacagattgtggctcagtttgacaaccataactcccaggtg
tggcgtgtgagctggaacatcaccagcaccctcctggcctcctctggtgatgatggctgt
gttcgcctctggaaagcaaactacatggacaactggaagtgcaccggcattctaaaagga
gacggcagcccgctcacaggctcgtctggtcagcccacagccatgagcaccgtcgtgggt
tcctccgttcagacctcccagaatgccctgaacgggatgtctgcaggaaggtatttcttc
ccgcctctggatcctcccagagcggggaccaggtatggccacctgctgcctccctcctct
ctcatagagcactgtgacgctgagcccatgcagcctcagcaacaggctctttctcacaga
cgctcctctagagcactgctgaccttaccagaggctgaaggacagtga

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