KEGG   Plectropomus leopardus (leopard coralgrouper): 121946362
Entry
121946362         CDS       T07454                                 
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
plep  Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:plep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plep03036]
    121946362 (wdhd1)
Chromosome and associated proteins [BR:plep03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    121946362 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Beta-prop_THOC3 Ctf4_C Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 HMG_WDHD1 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_WDR3_2nd Beta-prop_RIG_2nd HMG_box WDR55 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st DSE1_N Beta-prop_WDR19_1st eIF2A Beta-prop_SCAP Beta-prop_VPS8 NBCH_WD40 Tricorn_2nd Beta-prop_NOL10_N KNTC1_N Beta-prop_WDR75_1st DUF6476 HMG_box_2
Other DBs
NCBI-GeneID: 121946362
NCBI-ProteinID: XP_042346859
LinkDB
Position
1:7250429..7267179
AA seq 1129 aa
MPCERKPIRFVHSEGHTEVCFDDSGKFIVTCGNDGDVRIFEGLDDDDPKFIGVGEKAYSL
ALKNGKLVTASSSNTVQIHTFPDGDPDGILTRFTTNATHVTFNSSGSRVAAGSSDFMVKV
VEVSDSSQQKTLRGHEAPVLSVSFDPRDDFLASASCDGSVVVWSIEEQSQLISWPLLQKT
NDVSNAKSLCRLAWQPVTAKVLAVPVETKVHLYERGSWDHVSTLSDDLLTQTINVVAWSP
CGQFLAAGSVGGSLTVWDVNSKLCVERQKHEKGFTVCGLAWHPSGSQIVYTDTEGGLCLL
DGFSTSTSSTNTSKQAPAKKSAKDYDDLFDDDDDRLMDEGLSDTNSPVKKSVAVDEDDDD
DFLMPATGRVRNRGAILDDENSLDTGSLKLGQDRFGDDDDTGSAVVPAAPLLPPRPVYEG
PMPTPPQKAFQPGSTPAHLTHRFMMWNSVGIIRGYNDEQDNAIDVEFHDTAVHHAMHLTN
SLGHTMADLSQEAALLACPSTDELASKLQCLHFSSWDTNKEWMVDLPKGEDAKALCLGQG
WAAVATSTLMLRLFSIGGVQREIFSLPGNVVCMAGHGEQLLIVYHRAPGFDGEQALGVQL
LQLGQKKRQLIHGEPLPLSHKSHLSWLGFTAEGTPCYVDSDGVVRMLNRSLGNTWSPVCN
TRETCKSKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPLCQTSTEKG
QMEEQFWRSVLFHNHYSFLSSSGYEIDEDGQSQSQKEQQELLMKMFALSCKLEREFRCVE
LAEFMTQNVVTLAIRYASRSRRMALAQRLSEIALEKANQIQEEEPEEQEEEPKYITTRRP
SGYGQSEVTGGHNNNRRYQEEEEEQEEKLREEEEEGGQEMETEEAAETKKRVNPFAKEAG
SPVKPSLTPIGRVGRANPFKVSGSGKPSSSPGQPRVTNILDNMTSSRKLSPLSGPAGKPN
KGPVLKPLVPRPKTKTQSTLLQMSGTKTASKTAQKNTEPSEGQQKQPDAPPQAPPADDTE
NKRPKTGFQFWLEENRKSITADHPDLEETEIIKEAMGRFRTLSAEERLSWTERAKGQTGD
AADLKKRKRAEGGGAENENGQAEADENSAKKKKSLDPSSKLSAFAFNKN
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgccttgtgagaggaagccgatccgcttcgtccactcggagggacacaccgaggtctgc
ttcgacgactccgggaagttcattgtaacctgtgggaatgatggagatgttcggatattt
gagggtctggatgatgacgatccaaagttcatcggtgtaggggagaaggcgtactctctg
gcgctcaagaatggcaagctggtgacagcaagctccagcaacacggtgcagatccacacg
tttcctgacggtgacccagatggcatcctgacacggttcactaccaatgccacacatgtc
acctttaacagcagcggctccagagttgctgccggttccagtgactttatggtaaaagtg
gtggaggtgtcggacagcagccagcagaaaacactccggggccacgaagcgcccgtcctc
agtgtcagctttgaccccagagatgactttctggcgtctgccagctgtgacggctccgtc
gtggtgtggagcatcgaggagcagtctcagctcatcagttggcctctgctgcagaagacc
aatgacgtcagtaacgcaaagtctctgtgtcgactggcctggcagcccgtgacggcgaag
gtgttagcggttcccgtggagacgaaggtgcacctgtacgagcgagggtcctgggatcat
gtgagcactctgtccgatgatctgctgacgcagacgatcaacgtggtggcctggtctcca
tgtgggcagttcctggcagccggcagcgtcgggggttcactgacggtgtgggacgttaac
agcaagctttgtgtggaaagacagaagcacgagaagggcttcacggtgtgcggtttggcc
tggcatccgtcaggcagccagatcgtttacacagacacggagggcggcctgtgcctgctg
gacggattcagcacctccacatccagcaccaacacctccaagcaggcacctgccaaaaaa
tcagccaaagattacgacgacctgtttgatgacgatgatgacagactcatggatgaaggg
ctgagtgacaccaactcgccggttaagaaatctgtcgcggtggatgaagacgatgacgat
gatttcctcatgcctgcgacagggcgggtgaggaacagaggggcgatcctcgacgatgag
aactcactggacactggatctctgaagcttggtcaggacagatttggggacgacgatgac
acaggcagcgctgttgtgcctgcagctccactgctgccccctcgtcccgtgtacgaggga
cccatgccaacgcctccccagaaggcctttcagcccggctccacccctgcacacctcaca
caccgcttcatgatgtggaactcggtgggaatcattcgaggctacaacgatgaacaggac
aacgccattgacgtggagtttcacgacacagctgtgcaccacgccatgcacctcaccaac
tcgctgggtcacaccatggctgatctttcccaggaggccgcgctgctggcctgccccagc
acggacgagctcgccagtaagcttcagtgcctccacttctcgtcatgggacaccaataag
gagtggatggtggacctgccgaagggcgaggacgcgaaggcgctgtgtctgggtcagggc
tgggcggccgtcgccaccagcacgctgatgctcagactcttctccatcggtggagtccag
agagaaatcttcagcctgccggggaacgtggtctgcatggcgggacacggagagcagctg
cttatagtctaccatcgggctccgggtttcgatggggaacaggctctgggtgtccagctg
ctgcagttgggtcaaaagaagaggcagctcatccacggagaacccctccctctgtctcac
aagtcccacctgtcctggctcggattcactgctgagggtactccatgctacgtggattca
gatggggtggtgcggatgctgaaccgttcccttggcaacacatggtcacctgtatgtaac
accagagagacctgcaagagcaaatcagaccactactgggtggtcggggtacatgagaac
cctcagcagctcaggtgtatcccctgtaagggctccaggtacccccccaccctgcccaga
cctgctgtggccatcctgcccttcaagctgcctctgtgtcagacctccacagagaaagga
cagatggaggagcagttctggcgttcagtcctcttccacaaccactacagcttcctgtcg
tccagcggctatgagatagatgaggacggacagagtcagtcccagaaggagcagcaggag
ctgctaatgaaaatgtttgcactgtcctgtaaactggagagagagtttcgctgtgtggag
ctggcggagtttatgactcagaacgtggtcactctggccattcgatacgcgtcaagatcc
agacgcatggccctcgcccagcggctcagtgagatcgccctggagaaagccaaccagatt
caggaggaagagccagaggaacaagaagaggagccaaaatacatcaccaccagacggccc
tctggatacggtcagagtgaggtcacaggaggacacaacaacaacagacgatatcaggag
gaggaagaggagcaagaagaaaagctcagggaggaggaagaggaaggtggacaggagatg
gagacagaggaggcagcagaaaccaaaaaacgtgtgaatccgtttgctaaagaagcaggt
tcacctgtgaagccgtctctgacaccaattggtagagtgggacgtgcaaatcctttcaag
gtctccggctcagggaagccctcgtcttcgccaggtcagcctcgagtcacaaacatcttg
gacaacatgacgtccagcaggaagctgtctccactcagtggacctgcagggaaaccgaac
aaaggccccgtcctcaaaccgctggtcccccggcccaaaacaaagactcagtccactctg
ctgcagatgagcggcacaaagacggccagtaagacggctcagaagaacacggagccgtct
gaaggtcaacagaaacaaccagacgccccccctcaagctccacctgcagatgacactgaa
aataaaaggccgaagacgggcttccagttctggctggaggagaacaggaagagtatcaca
gctgaccacccagatctggaggagacggagatcatcaaagaggcgatgggacgcttcagg
acgctgtcagcggaggagcgactgtcgtggacggaaagagcaaaaggccaaactggagac
gcagcagatctgaagaagaggaagagagctgaaggaggaggcgcggaaaatgaaaatgga
caggcggaagcagatgaaaatagtgcaaagaagaagaaatctttggatccatcctccaag
ctttcagcgtttgcttttaacaaaaactaa

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