Plectropomus leopardus (leopard coralgrouper): 121946597
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Entry
121946597 CDS
T07454
Name
(RefSeq) trichohyalin-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121946597
Membrane trafficking [BR:
plep04131
]
Autophagy
Other autophagy associated proteins
Others
121946597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
121946597
NCBI-ProteinID:
XP_042347174
LinkDB
All DBs
Position
8:28057191..28081173
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AA seq
841 aa
AA seq
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MSRVFSISHTQMFTAVHCRLDATLKMNLEASRSFSSSMTTSSKSSAMCQCFAVLEDGVLA
HNLQEQEIEQFYTTNIQKNQLVQNDIRVAKRLQDEEEEEHAQQSTLFRQASRQLEEEDFE
YARVIQEEIQRCAEEAQRREQEDEEIAKRMQEEEMQRITRRSRGQDGHSEGSASDPALPP
PHQHTCSNRHQAEKQYSSTSTRWQCSTSDNHSDLTGPRADSPRGAAAQKNTTSWSNQGHR
DSIREIRSEFRERLSEDSEDSDTVFSEQLSVWSQRLNERHNTAPPRRQVSLHPPQERNYR
SLCSRSSFTDEHSGLEEEREEWNENYYENGDREKRRPRIWDQERNHREEYEHRSRNQEKD
LRLAEVRERRVSRSESVRLHDRSRQGKRDLARTWSYKDGPDKHVRFQENSRSSNRQQGDP
SGVWEMLGQILRERGVPVRFGSNGAPLQIRPQSRDSQVLHGSEVSCSDSQPHQRVFQRAA
TTRHSFHGDIRERRRSSYQENSGRDHREDRHRSNTEHDGNGYEISSRDSYLANREMGGSG
RWKEHRYDERERIANNCRVKRTTSEHRRWHGTIEERLSSEEEQEVERRVERPRRRAPQRS
QSFCSSGASTRVGSRHMAAGASLQQTPDEASLDLGDLQQVLEDEELAHKLQEEEEKLLRR
NSHPSPCTSYPAGDFRVAQVAQDEEIARFMQKQEMKAKRRSRELEGPASWREHRAMINHH
DRRAARDRPVQRERLDSEGLPSPTEDCSPENQPPSPLSTIPQAQHIRNIAEELDPTFQAR
RQSTESLRLGQTGPTCQSLPMPQSGLHDLLEEPTFIPPTKRQVDKSARTKPKEKKENCKQ
Q
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgtgttttcaattagccacacacagatgttcacagctgtacactgtagactc
gatgccactcttaaaatgaatcttgaggcctcacgttcgttctcatcgtccatgacaaca
tccagcaaatcttcagctatgtgccagtgttttgctgtgctggaggatggagtgttagca
cacaacctgcaggaacaggagatcgagcaattctataccaccaacatccagaagaaccag
ctggtgcagaatgacatccgtgtagccaaaagactgcaggatgaggaggaagaggagcat
gcccagcagagcaccctcttcagacaggcttccagacaactagaggaggaagactttgag
tatgcccgcgtaattcaggaggagatccagcgctgtgctgaggaggcccaaaggagggag
caggaagatgaggaaatagccaaacgaatgcaggaagaggagatgcaaagaatcacaagg
agaagcagagggcaggacggccacagtgaaggcagcgccagcgaccctgcactgccaccc
cctcaccagcacacatgcagcaaccgtcaccaagcggagaagcagtactcgtctacctcc
accaggtggcaatgttctacttctgacaaccactcagacttaactgggcctcgggctgac
tctcccaggggggcagcggctcagaaaaacacaacttcatggtcaaatcaaggacacaga
gattccataagggaaatcaggagcgaatttagagagcgtttgagcgaggattcagaggac
tcggacacagttttctctgaacagctctctgtctggtcccagagactgaatgaaagacat
aacacggcacctccacggcggcaggtgtctttacatccgccgcaagagagaaactacaga
agtctttgctctcgcagcagcttcacagatgagcacagcggcttggaggaggagagagaa
gagtggaatgagaactattatgaaaatggtgaccgagagaagaggaggcctagaatttgg
gatcaggaaaggaaccatagagaggagtatgagcacaggagcagaaatcaggaaaaagac
ttaaggttagctgaggtaagagaaaggcgagttagtcgcagtgaatccgtcaggttacat
gacaggagtagacaaggcaaaagagacctagcgaggacctggagctataaggacggtcct
gataaacatgtccgttttcaggagaacagcaggagctctaacaggcagcagggtgacccc
agcggtgtgtgggagatgctgggccagatcctcagagagaggggcgtgcctgtgaggttt
ggcagcaacggggcgccactacaaatcaggcctcaaagtagagacagccaggtgcttcat
gggagtgaggtctcctgcagcgactcccaaccacatcagagagtcttccagagagccgcc
accaccaggcacagtttccatggagatatcagggagaggaggagatcgtcataccaagag
aacagtgggagagatcacagagaggaccggcaccgtagtaacactgagcatgatggaaac
ggttacgagattagtagtagagactcgtatctggctaacagagagatgggaggcagtgga
aggtggaaggagcacagatatgacgagagggagagaattgcaaataactgcagggtcaag
aggacaactagtgaacacaggcgctggcacggtaccatagaagaaaggttaagctcagag
gaggagcaggaggtggagaggcgagtagagcgaccccgtcgaagagctccacagcgtagc
caaagcttctgcagcagcggggcttcgacaagggttgggtcacggcacatggcagcagga
gcgtcattgcaacagacaccagacgaggcaagcctggacctgggggatctgcagcaggtc
ctggaggatgaagaactggctcacaagctgcaggaggaagaggaaaagctgttgaggagg
aactcccacccctctccctgtacttcttacccggcgggagacttcagagtagcacaagtg
gcacaggatgaggaaattgcacgctttatgcagaagcaggaaatgaaggcaaagcgaaga
tctcgtgagttagaagggccggcgtcgtggcgcgagcacagagcgatgatcaatcatcac
gacagaagagctgcaagagacagaccggtccaacgagagaggcttgactcagagggcctt
ccgtcccccactgaggactgctccccagagaatcagccacccagtcccctctccactata
ccacaagcccagcatatccgaaacattgcagaggagctcgacccgactttccaggccagg
aggcaaagcacagagagcctcagactgggacaaacaggtccaacttgtcagtcactgccc
atgccgcagtctggcttacatgacctccttgaggagcctactttcatcccacctacaaaa
cggcaggtggacaaatcagctcgcactaaacccaaagagaagaaagaaaattgcaagcag
caataa
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