Plectropomus leopardus (leopard coralgrouper): 121946805
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Entry
121946805 CDS
T07454
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03250
Viral life cycle - HIV-1
plep04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121946805 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121946805 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plep03400
]
121946805 (samhd1)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121946805 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
HD
PDEase_I
HD_assoc_2
AbiTii
DUF5525
Motif
Other DBs
NCBI-GeneID:
121946805
NCBI-ProteinID:
XP_042347499
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All DBs
Position
8:20929057..20941976
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AA seq
623 aa
AA seq
DB search
MENRKRPFEVVVTPGDSFHTPDKRVSAVRLPDSHYMRWGVEETCRYLRSEGLAEWEDTFR
AQKITGVGLRYLNDADLEKIGVQYLGDRLAILHSLRKLWQIEAELNKVFNDPIHGHVELH
PLLIKIIDTPQFQRLRSLKQLGGTYFVFPGASHNRFEHCIGVGHLAGQLVKALNERQPEL
LISHRDILCVQIAGLCHDLGHGPFSHMFDGQFIPKARPGITWKHERASLDMFDYLVNDNS
LKPVMEQHGLVLSEDLVFIKEQIAGPLDPSGAKGKKWQYKGRPENKSFLYEIVANKRNGI
DVDKWDYFARDCYHLGIQNNFDYRRFLKFARVCEVDGQKHICTRDKEVGNLYDMFHTRNC
LHRRAYQHKVGNIIETMITEAFLKADGHIKIEGSGGKLFTLSTAIDDMEAYTKLTDYVFE
QILYSSSPELAESRQILRNIICRRLYKCLGQTQTEEPLDVTRENIQSWEAELAQSIPQSG
RQDVSLQPEDFVVNVIFMDYGMGVKNPINSVRFYCKDDPTKAIQIRKNQVSKLLPETFAE
QLIRVYCKKTDDRSLEAAKKHFVQWCMDKDFSKPRDGDIIAPELTPLKDSWSHNNEGEGG
EGGSSRRGNLVNGQEKAKVQLNF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgaaaacggccgtttgaggtggttgtgacccccggtgacagcttccacacg
ccggacaagagagtgtccgcggtccggctgccagactcgcactacatgcgatggggagtg
gaggaaacgtgtcgctacctgcgatcagagggtctcgctgaatgggaagacacattcaga
gcacaaaaaatcacaggtgtcgggctgcggtatctcaatgatgctgatctggagaagatt
ggcgtgcagtaccttggtgatcgtctggcgatcctgcacagcctcaggaaactgtggcag
atagaagcagagctaaataaggtgtttaatgatcctatccacgggcatgtggagcttcac
cctcttctcatcaaaatcatcgacacacctcagttccagagactacgaagccttaagcag
cttggagggacctactttgtttttcctggagcatcccacaaccgctttgaacactgcatt
ggggtgggtcacttggcagggcaacttgtaaaagctctgaatgagaggcagccagaactc
ctcatctctcacagagacatcctttgtgtgcagatcgccgggctctgccatgacctggga
catggaccattttcccacatgtttgatgggcagttcatccctaaagcacgtccaggaatt
acctggaagcatgagagagcgtctctggacatgtttgactacctggtgaatgacaacagc
ctgaagccggtgatggagcagcacggcctggtgctgtcggaggacctggtctttattaag
gagcagattgccggaccattggatcctagtggagctaaaggaaagaagtggcaatataaa
ggtcgtccagaaaacaagtctttcctctatgaaattgtggccaacaaaagaaatggcatc
gatgtggacaagtgggactactttgccagggactgctaccacctgggcatccagaacaac
tttgactatcgccgctttctcaagtttgccagggtgtgtgaggtagacgggcagaagcac
atctgcacgagggacaaggaggtcggcaatctgtatgacatgttccacacaaggaactgt
ctccacaggagagcctaccagcacaaagtgggcaatatcatagagactatgatcacagag
gcctttttaaaagcagacgggcacatcaagattgaaggctcaggagggaagctgttcact
ctgtccacggccatagatgacatggaggcctacaccaagctgacagattatgtgtttgaa
caaatactctactcctcttccccggagctggctgagtcgaggcagattctacgcaacatc
atttgtcgacgcctctacaagtgtctgggccaaacccagacagaagagcccctggatgtc
acccgggagaatattcaaagctgggaagcggaactggctcaatctatccctcagagcggc
cgtcaggatgtcagtctgcagccagaggactttgtcgttaatgtcatttttatggactat
gggatgggggtaaagaaccccatcaacagtgtgcgtttctattgcaaagatgacccaacc
aaagccatccagattcgcaagaaccaggtgtctaaacttctcccagagacgtttgccgag
cagctcatcagggtctactgcaagaagacggatgacaggagtctggaggcagccaagaaa
cactttgtccagtggtgcatggacaaggacttctcaaagcccagggatggagacattata
gcacctgagctgacacctctgaaagacagctggtcgcacaacaatgagggagagggaggg
gaaggtggcagctccaggagaggaaacctagtaaatggacaggaaaaagccaaagttcag
cttaacttctga
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