Plectropomus leopardus (leopard coralgrouper): 121947975
Help
Entry
121947975 CDS
T07454
Symbol
pcdh12
Name
(RefSeq) protocadherin-12 isoform X1
KO
K16499
protocadherin delta 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plep04515
]
121947975 (pcdh12)
Cell adhesion molecules [BR:
plep04515
]
Cadherins
Protocadherins
121947975 (pcdh12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
DUF5527
Motif
Other DBs
NCBI-GeneID:
121947975
NCBI-ProteinID:
XP_042349124
LinkDB
All DBs
Position
9:34410198..34423814
Genome browser
AA seq
1169 aa
AA seq
DB search
MLLALLLVLSLLSDTRSSELSSITVQYRVWEEQQTGTRVGRLLDDLRQRDEGGLLEDFQV
VEHGKALPFSVSSRDGLVSTQGRLDREELCRGSDLCELAFSVLYRKSGAVNCLRVRVEVM
DLNDHSPSFPGSLQEVEISETAGLRMRIPLDRAMDPDAGPNSLQTYSLSVNQHFALDVTM
APGGSKQAELVVIRELDRELQASFDLTLVAWDKGNPPRSGSTLVRVNIQDSNDNSPTFED
STPTVELSEDTACGTTIITLRASDPDQGANGEVEYLLSKHMRPEVQRLFAVDPQSGAVSL
RAPLDYEAQPSYEVIIQARDRGPNAVPTHCKLHVKLRDVNDNAPRIHMTWTPPNSPVATV
LEGAAEDTFLALVMVSDADAGENGRVTALIQPGSGPFRLKRIHRDNYMIVTNGSLDREQV
THYNISLLAQDYGDPPLSCVKHLPVHILDENDNAPVFSSSLYRASFMENNAVGYQALRVQ
AHDVDLEFSGRVSYFIRNANEVETEAELFSIHPTSGIISVQRPLDYEESHSYSFTVEAVD
QGHPPLTSTALVQIDLQDANDNHPVIVEPKPRRGVASLSLPVNTERGEIVTELGNAVEEG
ATPPPSSHAVAEGLVGFLASTIKAEDPDSGLNRQLSYLITDGDSDRMFWLDETTGQLFVN
TTNATELIGKTFRVNIAVSDLGSPRLTTKATLEVTFINLKDALKNSSPGTRGQLSFTMMM
AICLGATCLLLLLAIALVTTFCRPEKRDGRAYNCRQAECTYTRHPRRPQKNIRKSDIQLI
PVIRGRREEPVEDAAEAQPLALPPVMSEDPTERQYTLTPSAICSQSYPEGDATQPAAHHC
RTLRKPGHMELDGALTPASSYRTLRSARNPSSSSSVSHTSTLKRQTDGEEAERLSSSSQA
TLRRPRTSEGRGDAEHRQILRNLVRLSMAAFGDAIELSSASPEVQQISQLLSLLRQGQLQ
PRPNFRGNKYYHRNARYGGQDCSDWLSTKDSGHGESEAGDVDWEPGRDSPIDPQLEEGLN
HLLHDPDDVFSEVDDPSWMARLSLPLSGDYHDNVFVPNRPPSTDSELVPRGALDSSSFST
FGKTPEKEAPVGGALLSEVSTLFEMLMTQKADAHPGPRPDVLYRLSAAYRRSLGLDATAT
ASSATTTVNTARSSGSAERRAGPAAGLYQ
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggctctgctcctggttctgagcctcctctcggacactcgctcctccgagctg
tcatccatcactgtccagtaccgggtttgggaggagcagcaaacgggaacccgggtcggc
cgtctgctggacgacctccggcagcgggatgagggcggcctcctggaggacttccaggtg
gtggagcacgggaaagccctgcccttctctgtcagcagcagggacgggctggtctccacc
cagggccggctggaccgggaggagctgtgccgcggctcggacctgtgcgagctggccttc
agcgtcctctacaggaagagcggcgcagtgaactgcctgcgggtgcgcgtggaggtgatg
gacctgaacgaccacagtcccagctttcccggctcgctgcaggaggtggagatctcggag
acggccggcctccgcatgcggatccctctggaccgggccatggatcctgacgcggggccc
aacagccttcagacatactcactgtctgtcaaccagcactttgctctggacgtgaccatg
gcgccgggcggaagcaagcaggcggaactggtggtaatccgagagctggaccgggagctg
caggcctccttcgacctcacgctggtggcttgggacaaagggaacccgcccaggtccggg
agcacactggtccgagttaatatccaggactcgaacgataatagccccacatttgaggac
agcacacccaccgtggagctgtccgaggacacggcctgcgggaccaccatcatcaccctg
cgggcctcggatcccgaccagggtgccaacggagaggtggagtacttgctcagtaaacac
atgcggccggaggtccagaggctgttcgcggtggatccacagagtggcgctgtgagtctc
agagcccctctggactatgaggcccagccttcttatgaggtcatcatccaggcgcgggac
cgcgggcccaacgctgttcccacgcactgcaaactgcacgtcaagctccgggacgtcaac
gacaacgctcccaggatacacatgacctggacgccgcccaactcgcctgtagccacggtg
ctggagggcgcggcggaggacaccttcctggccctggtgatggtctcagacgcagacgca
ggagagaacggcagagtgacggcgctcattcagcccggttccggaccctttcgcctcaaa
cgcatccacagagacaattacatgattgtcaccaacggcagcctggatcgcgagcaggta
acgcattacaacatctcgctacttgctcaggactacggagatcccccgttatcctgcgtc
aaacacctgcccgtccacatcctggacgagaacgacaacgcgcccgtcttctcctcctcc
ctctacagggcgtcgttcatggagaacaacgcggtgggctaccaggcactcagagtccag
gcccatgacgtggacctggaattcagcggcagagtctcctacttcatacgaaacgccaac
gaggtggagactgaagccgagttgttctctatccacccgaccagcggcatcatcagcgtc
cagcgtcccctcgactacgaggagtcccacagctactccttcacggtggaggccgttgac
cagggtcacccgccgctcaccagcaccgccttggtgcagatcgacctccaggacgccaat
gacaaccaccctgtcattgtggagcccaaaccccgcagaggcgtggcctctctgagcctc
cctgtcaacacggagcggggggaaattgtcacagagctcgggaacgccgtcgaggaggga
gccacccctccacccagcagccatgccgtcgcagagggactggtgggattcttggcgtcc
accatcaaggcggaggacccggactcggggctgaacagacagcttagctacctcatcacc
gacggagactctgacaggatgttctggttggacgaaacgacgggtcagctgttcgtcaac
accaccaacgccaccgagctcattgggaaaaccttcagggtgaacatcgctgtgtcagat
ctgggcagcccccgcctcaccaccaaggccactctggaggtgaccttcatcaacctgaag
gacgccctgaagaactcgtctcctggcacccgcggccagctcagcttcaccatgatgatg
gccatctgcctaggcgccacctgcctgctgctgctgctcgccattgctctggtgacgacc
ttctgccgccccgagaaaagggacggccgggcgtacaactgcaggcaggccgagtgcacc
tacacccgccacccccggcgcccgcagaagaacattcggaagtctgacatccagcttatt
cccgtcatcagagggcggcgggaggagcctgtggaggacgccgctgaggcccagcccctg
gctctgccccctgtgatgtcagaggatccaactgagcggcagtacaccttaaccccgtcc
gccatctgctcccagagctacccagagggggacgccactcaacccgctgcccaccactgc
aggacgctccgaaaaccgggacatatggagctggacggcgctctgacacccgccagctca
taccgcaccctgaggagcgccaggaacccttcgtcctcctcttccgtgtctcacacgagc
acgctgaagcgccagaccgatggcgaggaggcggagcggctgagttcatcgtcacaggca
actcttcgcaggccaaggacgtcagagggacgaggggacgcagaacatcgacagatcctt
cggaacctggtccgactgtccatggcggcgtttggagacgccatcgagctgtcctcagcg
tctccggaggtccagcagatctcccagctcctttctctgctgcgacagggtcagctgcag
ccccgaccaaacttcagagggaacaagtactaccatcgcaacgccagatatggaggccag
gactgctctgattggctgagcaccaaagacagtggacacggagagagcgaggctggagat
gtggactgggagccgggacgagactcaccaatcgacccccagctggaggaaggactgaac
cacctgctgcacgaccccgacgatgtcttctctgaggttgatgacccctcctggatggcc
cgcctctccctcccactcagcggcgattaccacgacaatgtgtttgtccccaacaggcct
ccgtccacggacagtgagctcgttccacggggcgccctggactcctcctccttctccacc
ttcggtaagactccagagaaggaggcccctgtgggcggggccttgctgtctgaggtcagc
acgctgtttgagatgctgatgacacagaaggccgacgcccaccccggcccgcggcctgac
gtcctgtaccgcctctctgcagcgtaccgccgctcgctgggactggacgccactgccacc
gcctcctccgccaccaccacagtcaacacagcaaggagctctgggagtgcagagcggagg
gcggggccagctgcaggactttatcaatag
DBGET
integrated database retrieval system
