Plectropomus leopardus (leopard coralgrouper): 121948016
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Entry
121948016 CDS
T07454
Symbol
lmo7b
Name
(RefSeq) LIM domain only protein 7b isoform X1
KO
K06084
F-box protein 20
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121948016 (lmo7b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121948016 (lmo7b)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121948016 (lmo7b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121948016
NCBI-ProteinID:
XP_042349184
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All DBs
Position
1:14903209..14941312
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AA seq
1257 aa
AA seq
DB search
MEWRQQTSVSCADAFNEARRWIEEVTGKSFGCKDFRAALENGVLLCDLINQLKPGIIKRV
NRLSTPIAGLDNVNVFLKACGKLGLNVSQLFHPGDLQDLSTRATLRRDESSRRLKNVLIT
IYWLGRKAHLDAFYSGPQLNLKAFEGLLGLALSKALDEAMFVKDCWYPEREDCRRMRPGY
KTANSVDSIEVQESRTLRQNSEGCGSDAEAEQVFKMENTQPSTQQKKGYFPPPLQRRKQG
QEENGSPLSRANQIQVRPERPVQVNPGWIWSKSLSDIPMVYPVRKVPDGNTIYDVDQDTS
IAGEWNQEKIRKCSVAAKDSEAQWHDELTKWKNRRRSTKSDIRRKSQDREHVINQMANGA
VAKYEKNEAQGGLRKREQQSPRRHNPAPRPYSTSPPAKATSSHLRPHTRALLARSYATEA
PFSPTAQRSSYNSAHTQGSSVGAMPASDGNFLGEETHFASLASDGAAVTTPSPDCRFSSQ
TQVKLQGSSAPFQPTSAVAQSEHVFTNQISTLITTLQPNVMTKSTNTRDPPESMSSHKEP
PLCVGAKTGVDALEDSSQEESQKTSWEPAAEPGRGQQAASFYKYLSRTGSWSSSASLPRG
YRRSEGSSRLSSAITARPFGTKPSRVSSLPRLRNVDDNQGLLLTSEKEESVSPTNKSALK
RQTATVQLQSPHQASVRQQETGQTKQKASVQLEEVKGATLSGQTSFQTNGYHSQPYTQTQ
QLPQPYADLQTLHNKSSTLPSNASTDLPKVDHSDMRVSLTLKPNSRPDFGFQTHWDSTGA
RVKFIQPDSPAELCQLRVDDEIVAVNGVAVAHMNYNQWKDKMTSSLQTGSLTMDIRRYGN
KDWSTSEGSHHNQPGQSRVTLNLTAAAPVLTGRPDHHANSGASAETAGRNLSQFNGQTDN
VLQGKVMHGELSDHHKTARSKGGSESAISDLQVPSLSPSSSSWSWDREEDRRRQEKWQEE
QERLLQEKYQRDQERLESEWQRAQQEAKRELCRKQNTFEMTNGGGGPASTQLHVNGLTNK
SREEEQSPDRDELKEAGSKPQSRAQGEQHDKITEQAWAEDFEQLSPAHRAKSMSTPALAG
PYKQARGDERKIKVQAVSKAEKDRQQILEEMKKRTQLLTDNSWIRQRSSSFYKEPVYLGV
PMKRYESLDDLDSLRQSPLSTATFSYPRPHSAAAGYYAPSRNSSSRYSTGSMLSQRHTFD
SSHHGGVWAANDISEELRLESRFESETGNPTVSPAISNSSPLVPPPCDQHAVLRITE
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgccagcagaccagtgtcagctgtgcagacgcgttcaacgaggctcgacgc
tggattgaggaagtgactggaaaatcatttggttgcaaagacttccgtgcggccttagag
aatggagtcctgctttgcgacttgatcaaccagttgaaacctggcatcattaagagagta
aacaggctttctactcccatcgctggtctggataatgtgaatgtattcctgaaagcctgt
gggaaactggggctgaatgtgtctcagctgtttcatccaggagacctgcaggacctgtcc
actcgggcaacactcaggcgagatgaaagcagcagaagactcaaaaatgttctcatcaca
atctattggttgggtcgcaaagctcacctggatgctttctacagtggtcctcagctgaac
ttaaaggcctttgaagggcttttagggttggctttgtccaaggctctagatgaggccatg
tttgtgaaagattgctggtacccagagagggaggactgtcggcgtatgagaccgggctac
aagacggcaaactctgtggacagcattgaggttcaggaatcccgaaccctccgccaaaac
agcgaaggttgtggaagtgacgctgaagctgagcaggtgttcaagatggaaaacacacag
ccatcaacccagcaaaaaaaaggttatttcccaccgccactacaacggagaaagcaagga
caggaggagaatggaagtccgctgtccagagcaaatcaaatccaggtcaggcctgagaga
ccagttcaggtcaaccctggctggatttggagcaaatcactcagcgacatcccaatggtt
taccctgtgcgtaaagttcctgatgggaacacgatttacgatgtggaccaggacaccagc
atcgcaggggagtggaatcaagaaaaaatacgcaagtgcagtgtcgctgccaaggacagt
gaagctcagtggcatgatgaattgacaaagtggaagaatcgtcgcaggagcaccaagtct
gacatccgcaggaagtcacaagacagagagcatgttattaaccagatggcaaacggggct
gtggctaaatacgagaagaatgaagcacaaggtggactgcggaagagagagcagcagtca
ccacgaaggcataatcctgcacctcgtccttactccacctctcctccagcaaaagcaacc
agctctcatctccggccacacactcgagctctgctggcccgcagctacgctaccgaggca
cctttcagccccacggctcaacgcagctcctacaactcagcccacactcagggatcatca
gttggagccatgcctgcctctgatgggaacttcctgggagaggagacccactttgcctcc
ttggcttcagatggagcagcagtaaccactccatccccggactgccggttcagctctcag
acacaagtcaaattgcagggcagctcagctcctttccagcccacatctgcagtggcccag
tcagaacatgtttttacaaaccaaatctccactctgatcacaactttacagccaaacgtg
atgacaaagtcaactaacaccagagatcctcctgaatccatgtcgagtcacaaggagcct
ccactctgtgttggtgcaaagacaggagttgatgctctggaggactcgtcccaggaagag
agccagaagacatcatgggaaccagctgcggagccgggcagaggccagcaggctgcgagc
ttctataagtacctctccagaaccggatcgtggtctagctcagccagcctccctcgtgga
taccggaggtctgagggctcatctcgtctctcttctgcaatcacggccaggccgtttggg
accaagccgtccagggtgtcctcgctgcccagactgcgcaacgtagacgacaaccagggt
ctgctgctgacaagcgagaaagaggaatctgtttctccaaccaacaaatctgcactcaag
agacagactgcgactgtccagctgcagagtccgcaccaggcttcagtcagacagcaggaa
actggccagacgaagcagaaagcttcagtacagttggaggaggtgaaaggagccactctc
tccggtcagacctccttccagaccaatggctaccactctcagccctacactcaaacccag
cagctgccacagccgtatgcagacctgcagaccctccacaacaaaagctcaactctccca
tctaacgcaagcaccgacctcccaaaggtggatcacagtgacatgagagtgagcctaact
ctcaaacccaacagtcgaccagactttggtttccagactcattgggactccaccggggcg
agagtcaaattcattcaacctgacagtccagcggagctttgccagctgcgtgtggacgat
gagattgtggctgttaatggagttgcagtggcacacatgaactacaaccagtggaaggat
aaaatgacatcttccctacaaactggcagtctgaccatggacatccggcgctatggcaac
aaggattggagcaccagtgaggggagccatcacaaccagccaggccagagcagggtcacc
ctcaatctgactgctgcggcgcccgttctgacgggtcgccctgatcaccatgccaacagt
ggtgcctctgcagaaaccgcaggcaggaatttgtcccaattcaatgggcagacagacaat
gttttacagggtaaagtcatgcatggagaactttctgaccaccacaagacagccagaagt
aaaggaggctcagaatctgcaatatctgatctccaggtgccatccctcagcccctcctca
tccagctggtcgtgggaccgcgaggaggatcgaaggcgtcaggagaagtggcaggaagag
caggagcgcctcctacaggagaaataccagcgggatcaggagaggcttgaatcagagtgg
cagagagcacaacaagaagcaaaacgagagttatgcaggaagcagaacacatttgagatg
accaatggtggtgggggccctgccagcactcagctccacgtgaatggattgacaaataaa
agcagagaagaggagcagagccctgacagagatgagctgaaagaagcaggatcaaaacct
caaagtagagcacaaggagagcagcatgacaaaattactgaacaagcctgggctgaggac
tttgaacagctgtctcctgcacacagggcgaagtccatgtctactccagccttagctggc
ccctacaaacaggcaagaggtgatgagaggaaaataaaagtacaggctgtgtctaaagct
gagaaagacaggcagcagattctggaggagatgaagaaaaggactcaacttctgaccgac
aacagctggatacgtcagcgcagcagcagcttttataaggagccggtctatctcggggtt
cccatgaagagatacgagtctctggacgacctggactctttacgtcagtctccactctcc
actgctacattcagttaccctcgtcctcattcagctgctgcaggttactatgccccgagt
aggaactcctcctcccgctacagcactgggtctatgttatcccagagacatacatttgac
tcctctcatcatggcggtgtgtgggctgcaaacgacatctcggaggaactgagactggaa
tccaggttcgaatccgaaacgggaaaccctactgtgagccctgctatttccaactcaagt
ccgctggtgcccccgccatgtgatcagcatgccgtactcagaatcacagagtaa
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