Plectropomus leopardus (leopard coralgrouper): 121948046
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Entry
121948046 CDS
T07454
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03420
Nucleotide excision repair
plep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121948046 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
121948046 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121948046 (cul4b)
03400 DNA repair and recombination proteins [BR:
plep03400
]
121948046 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121948046 (cul4b)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
121948046 (cul4b)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121948046 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
121948046 (cul4b)
Exosome [BR:
plep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121948046 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
121948046
NCBI-ProteinID:
XP_042349230
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Position
9:22956995..22970155
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AA seq
864 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARPAATDVKTDSGNITSPKKRKINGSEREDTTDTISSSPPKT
LNSSSSSSSSSCSPTPLHIQKKLRFEDSVDFIGLDVKMAEEAAAASCSNNKSKAVFLPGG
VGHHANGLTKTAGSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAIQN
STSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLFLKKI
DKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDG
ILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQERE
VPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLLDENR
IQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHI
IDICFLKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDK
IMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMF
KDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFK
TFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKL
ATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMK
ETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKR
IESLIDRDYMERDKENSNQYNYVA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
ccagcggctactgatgtcaaaaccgacagcggcaacatcacatctccgaagaagaggaaa
ataaacggctccgagagggaagacactactgacacgatctcctcttcacctcccaagacc
ctgaattcctcctcttcctcctcctcctcctcctgctctcccactccgctgcacatccag
aagaagttgaggtttgaggattcagtggatttcattggactggatgtgaaaatggctgag
gaggctgctgctgcttcgtgctctaataacaaaagcaaagccgtgttcctgcccggtggc
gtgggacatcatgcaaacggactgacgaaaaccgcaggctccggcaccttttccaacagt
aaacccggtgctgccaagaaactagtcatcaagaacttcaaagaaaagcccaaattgcct
gagaactacacgcaggagacctggcagaagctgaaggaggcggtggaggccatacagaac
agcacttcaatcaagtacaatctagaggagctctatcaggctgttgagaacctgtgctct
cataagatatctgccaagctttacaaacagctgagagctgtgtgtgaagaccacatcaag
gcacaaattgatcaattcagagaggatgccctggacagtgtgcttttcctaaagaaaatc
gataagtgctggcaagatcactgtagacaaatgatcatgattaggagtatttttttgttt
ttggaccgcacgtacgttttacaaaattcaatgctgccgtcaatctgggacatgggtctg
gagctgttcaggttctacatcatcagtgacctgaaggtccagagtaaaaccatcgacggg
atcctgctgctcattgagagggagcgaaatggagaggcgatagaccgcagtctgctgagg
agcctgctgagcatgctctctgacctgcagatttatcaagactcctttgagcaacgcttt
ttggaggaaactaatcgactgtacgcagcagagggacagaggctgatgcaggagagagag
gtaccagaatatctccatcatgtcaacaagcgcttagaggaggaggctgacagggtcatc
acatatctagaccagagcacacaaaaaccgctcattgctactgtggagaagcagttgctg
ggtgaacatctcacagctactctgcaaaaagggctgacgcacctgctggatgaaaacaga
attcaggatctgtctctcctctatcagctcttcagtcgagtccgaggtggtgttcaggtc
ctcctgcagcactggatagagtacataaaggcttttggcagcacaatcgtaatcaatcca
gagaaagacaaaacaatggtgcaagagttgctggacttcaaagacaaggtggatcacatc
attgacatctgcttcttgaaaaatgagaaatttgtcaacgccatgaaggaggctttcgaa
acattcatcaacaaacggccaaataaacctgcagagctcatagcaaaacacgtggattca
aagctgagggcaggaaacaaagaagctacagacgaagagctggagaagatgttggataag
atcatgattatctttagattcatctatggaaaagatgttttcgaggccttctacaaaaag
gatctggcaaagaggttgttggttggaaaaagcgcctctgtggatgctgaaaaatcgatg
ctgtcaaagctgaaacatgaatgtggagcagcgttcaccagcaaactggaggggatgttc
aaggatatggagctttcaaaagacatcatggtacagttcaaacagtatatgcagtgccaa
aacattcctggcaacattgagctgacagtgaatatcctcacgatgggttactggccaacc
tacgtcccaatggaagtgcacctgcctcctgagatggtgcgactgcaggagatcttcaag
accttctacctgggcaaacacagcggcaggaagctgcagtggcaatcaacactgggccat
tgtgtcttaaaagctgaatttaaagagggcaagaaggagctgcaggtgtcactcttccaa
acacttgtgctactgatgtttaacgaaggagaggagttcaccctggaggagatcaaactg
gcaacaggaatcgaggacagtgaactgcgtcggactctgcagtcgctggcttgtgggaaa
gcacgcgtcctcaccaaaatcccaaaaagcaaagacgtggaggacggggacaagttttct
tgcaatgacgacttcaaacacaagctcttcaggatcaaaataaaccagatccagatgaaa
gaaacggtggaggagcaagccagtaccacagaaagggtctttcaggatcgtcagtatcag
attgatgctgccatcgtgcggatcatgaagatgaggaagactctgagccataacctcttg
atgtctgaagtgtacaaccagctcaaattccccgtcaagcctgctgacttgaagaagagg
atagagtctcttattgacagggactatatggagcgtgacaaggagaactccaaccagtac
aactacgtggcttag
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