Plectropomus leopardus (leopard coralgrouper): 121948139
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Entry
121948139 CDS
T07454
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like isoform X1
KO
K12597
protein AIR1/2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121948139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121948139
03016 Transfer RNA biogenesis [BR:
plep03016
]
121948139
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
121948139
Transfer RNA biogenesis [BR:
plep03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
121948139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
121948139
NCBI-ProteinID:
XP_042349352
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All DBs
Position
9:18339179..18347664
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AA seq
488 aa
AA seq
DB search
MDYTKENEDDDGEEGSKDDLSFIEDYSSSGGEEEFEFTQQKHHSSCKQTARLNRESSPPL
LLAFNITSGRSLQLSRQSSASTLQEDEEDSDQPIEEWMIVEGEEQVGDSSIQLNLSYWSS
SEDDSGDEDQTEESVKNTWAISEKDKYGADWSLPSRYFLTGRSLTCNICNRTGHLAKSCY
YHKKCPTCVLCGLQGHIQRDCPGRPCPSCGLPSHGLRPCGRPPVWKQHCQRCGMSGHLSD
ACPDTWRQYHLTIRLELPVRPRTVLKHKKCPAHCYNCSKRGHYGYECTKRRMISGTFPSL
PYVCHYDSMEDILQRHTGKQKRARDLLGAGSLPLSDQQHLSAPTAESGEKNQPVQGRNNT
KQATCSRIGRRKTWPERRRERREVKKLRREAQARREGGLLGRSTRNSDDEVCPADPFCSA
LRGHEQSTLSPQRKRRDEAGGRSRKSREAERWKKRGGMKRGDLYPHGVTDIGSENLLSPK
QRVRHRRR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggactacaccaaagaaaatgaagatgatgatggcgaggaaggcagcaaagacgacctt
tcctttattgaggactacagtagctcaggaggagaagaagagttcgagttcacgcagcag
aaacatcacagcagctgtaaacaaactgctcggctcaacagggagagctctcctccgctc
ctcctggccttcaacatcacctccggacggtctctgcagctcagccgccagagctctgcc
tccactttgcaggaggatgaggaggacagtgaccagcccatcgaggagtggatgatcgtg
gaaggagaggagcaggtgggagactcaagcatccagctcaacctgagctactggagcagc
tcagaggatgactctggagatgaagatcagactgaggaatcagtgaagaatacctgggcc
atatcagagaaagacaagtacggtgctgactggtcactgcccagccgctattttttgact
ggtcgttctctgacatgtaacatctgcaacaggacgggacaccttgccaaaagctgctac
taccacaagaaatgtcccacctgtgtcctttgtgggctccagggccacatccagagggac
tgtccgggccggccgtgtcccagctgtggactgccttcacacggcctcaggccctgtgga
aggcccccggtgtggaagcaacactgtcagcgctgtgggatgtcggggcacctttctgat
gcctgccccgatacgtggagacagtaccacctcacaatccggttagagcttccagtgagg
ccacggacagtcctcaaacataagaaatgccccgctcactgttacaactgctctaagagg
ggacactatggctatgagtgcactaagaggagaatgatcagtgggacttttccttcactg
ccttatgtttgccactatgactccatggaggacatcctccaacgtcacaccgggaagcag
aaaagagccagagatctgttgggtgctggatccctgcctctctcagaccagcagcacttg
tctgcaccaacagccgagagcggtgagaagaatcagccagtccaggggaggaacaacaca
aagcaggcgacgtgtagccgcatcggcaggaggaagacgtggccagagaggcgcagagag
agacgggaggtgaagaagctcaggagagaggctcaggcaagacgagaaggaggacttctg
gggcgatccacgaggaactctgatgatgaagtttgccctgcagaccctttttgttccgca
ctgcgcggtcacgagcagtccacactctcgccacagagaaaaaggagggatgaggcaggt
ggcaggagcaggaagagcagagaggccgagaggtggaagaagagaggagggatgaaacgt
ggggatttatatccccacggtgtcacagacatcggcagtgaaaaccttctttccccaaaa
cagagagtgcgccatcgccgaagataa
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