Plectropomus leopardus (leopard coralgrouper): 121948196
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Entry
121948196 CDS
T07454
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121948196 (ssrp1a)
03036 Chromosome and associated proteins [BR:
plep03036
]
121948196 (ssrp1a)
Transcription factors [BR:
plep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
121948196 (ssrp1a)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
121948196 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
121948196
NCBI-ProteinID:
XP_042349437
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All DBs
Position
9:18169041..18185749
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AA seq
728 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNLAQWRRVCLGH
GIKLGTSTGHVYKYDGFRDTDLEKISEFFKANYKVELEEKDMCVKGWNWGTAKFSGPLLS
FDVNDSTAFEIPLSNVSQCATGKNEVTLEFHQTDDTEVSLMEVRFYVPPSQSDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKVKQLREFAESDLEFSDERRSRKTGMKGNIDEYSDSDDDQHDAYLE
RMKAEGKIREEGNDSDDSGGESDESFNPGEEDDDIAEEYDSNASASDSSDDGDDSEDESA
KKKKIKKAKVVKEKKERKPRKEKKQKDKGGPKRPMSAYMLWLNSSRERIKSENPGISITE
ISKKAGEMWRQLGKDEKEEWETKAGEAKRQYDKAKKEYKESGGGATSSSKKESKKGGKKE
EKKRKSAGGDKDKERGGNDSFKSKEFIETSEESSSDSDHKSKSKRKKESEEEEEEAVSTP
ASSEEDSD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactagagttcaacgagatttaccaggaggtcaaaggctcctggaatgat
gggcggctgcgtttcagcaagcaaaatgtggtttacaagagcagcaagaccgggaaggtg
gacagcatcccggctggagagctcaacctggcccagtggagacgagtgtgtttaggtcac
ggcatcaagctgggcaccagcacgggacatgtctacaaatatgatggcttcagagacaca
gacttggagaagatctctgagtttttcaaggctaactacaaggtggagctcgaggagaag
gacatgtgtgtgaagggatggaactggggaacagcgaagttctcagggccactgttatca
tttgatgtaaatgacagcacagcattcgagatcccactatccaatgtgtcccagtgcgcc
acggggaagaacgaagtcactctggagtttcaccagacggacgacactgaagtgtctctc
atggaggtccgattctacgtcccgcccagccagtctgatgagcgacaagaccctgtggag
gcgtttgcccagaatgtgttgtctaaggctgacgtgatccaggccacaggagacgctgtg
tgtatcttcaaagagctgcagtgtcttacgcccagaggaagatatgacatccgtatctac
ccgactttccttcacctccatggtaaaacttttgactacaagatcccgtacaccaccgtc
ctccgtctgttcctgctgccacacaaggatcagaggcagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagacgcgttatcactttctcatcctgctcttctccaag
gaagaggacatcagcctcaccctcaacatgagcgaggaggatgtggagcgccgttttgag
ggcaaactcagtaaaaacatgtcagggtctctgtatgagatggtcagcagggtgatgaag
gccctggtcaaccgtaagatcactgtgcccggaaatttccagggtcactctggagctcag
tgcatcacctgctcctacaaggcgtcctcaggcctcctctaccctctggagaggggcttc
atttacgtccacaagccccccgtgcacctacgcttcgaggagatctcctgcgtcaacttc
gcccgaggcaccaccacaacacggtcctttgacttcgaaattgagaccaagcaaggaaat
cagtacaccttcagcagcattgagagagaagagtacggcaaactgtttgacttcgttaac
gccaagaagctcaacatcaagaacagaggattcaaagagaagaaggtgaagcagttaaga
gagtttgcagaatcggacttggaattctctgatgagcgacgatcacgaaaaacaggcatg
aagggtaatattgacgagtacagcgactcagacgacgaccagcacgatgcctacctggag
aggatgaaggctgagggcaagatcagagaggagggcaacgacagcgatgattcaggaggc
gaaagcgatgagtcgtttaaccccggagaagaagatgatgacattgcagaagagtatgac
agcaatgcctcagcaagcgacagcagcgatgatggagatgatagcgaagatgagagcgca
aagaagaaaaagatcaagaaagccaaagtggttaaggagaaaaaagagaggaaaccacgc
aaagagaagaagcagaaagataaaggcggccccaagaggccgatgagcgcctacatgctg
tggctcaactccagccgcgagcgcatcaagtcggagaacccgggcatctccatcacagag
atttccaagaaggccggagagatgtggagacaactgggcaaagacgagaaggaggagtgg
gaaacaaaggcaggagaggcaaagaggcagtatgacaaagcaaagaaagagtacaaagag
agcggcggaggagcgacttccagttccaagaaggaaagtaaaaaaggaggtaagaaggag
gagaagaagagaaagtctgctgggggagacaaggacaaggagcgaggaggcaacgacagc
tttaaaagtaaagagttcatcgagaccagcgaggagagttcatcagactctgaccacaag
agcaagtccaagaggaagaaggaatccgaagaagaggaagaagaggctgtatccacacct
gccagctcagaggaagactctgactaa
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