Plectropomus leopardus (leopard coralgrouper): 121948229
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Entry
121948229 CDS
T07454
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04120
Ubiquitin mediated proteolysis
plep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121948229 (syvn1)
04120 Ubiquitin mediated proteolysis
121948229 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121948229 (syvn1)
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121948229 (syvn1)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121948229 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
121948229
NCBI-ProteinID:
XP_042349502
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All DBs
Position
9:complement(5349474..5363233)
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AA seq
633 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGVFPFWGPFPAVPPPAAAAAAPGAADAPQSSTEAAQAAGSSQP
TSSTADAAAGAAAPGSALPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLSRLSE
EELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGGSGAASET
NSTASPPTAGSSTDSPSQERDSSSSEQVNGATVSTQPADSTSAASDTERKEESDEGAAGV
GEEDGEPNAAELRRRRLRKLETSSPSSPPPPDN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccttggtgaccgccaccagtctggcgctgactggggctgtggtggcg
cacgcttacctcctcaaacaccagttctacccgactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcctttgtgttggtgtttctgctgggaaagttc
atgaggaaggtgttctttggacagctaagggctgcagaaatggagcatttgattgagcgc
tcctggtacgctgtgaccgagacgtgcctggctttcactgtgttcagggatgacttctcc
cctcgcttcgtcgccctcttcacactgctgctcttccttaagtgcttccactggctggcc
gaggaccgggtggactttatggaacggagtccaaacatatcctggatttttcatttcaga
gtgttatctctcatgggactgctggctgtcctggacttcctgtttgtcaaccatgcctgt
cacagcatcattacccgaggagcttcagtccagcttgtgtttggatttgagtacgccatc
ctgctgaccatggtcctgaccaccttcattaagtatcttctgcacactattgacctgcag
agtgagaatccctgggacaacaaggccgtctatatgctctacactgagctcttcacaggt
tttatcaaagtgctcctctacatcgccttcatgaccatcatgatcaaggtccacaccttc
cctctgtttgccatccggcccatgtatctggctatgaggcagttcaagaaagctgtaaca
gatgctatcatgtctcggagagccatccgcaatatgaacacactgtaccctgatgctact
cctgaagatctgcaggcctctgacaacgtctgtatcatctgtcgagaggaaatggtcacc
ggagcaaagaaactaccttgtaatcacattttccactccagctgcttgcgctcctggttc
cagaggcagcagacctgcccaacctgtcgcatggacgtactgcgtgcttctaataacaat
cagactccagccccggctcaggccccgcctcctgctcctgcagcccccgccaacgccccc
gcagccccacctgccaacgtggctccaggcatgttacctggctttcctcctggtgtcttc
cccttctggggccctttccctgcagtgcctcctcctgctgcggcagctgcagctcctggt
gctgccgatgctcctcagagcagcaccgaggctgcacaggcagcaggttccagccagccg
acttcgtcgactgcagatgctgctgcaggtgctgctgctccaggatcagcactcccaggc
ttccccttctccttcccccctcctcccttccccactgcaccatggctgcccatgccacca
cctccgccctttgtgtcatcgatgcctcctcctcctccgtctctgtcgcggctctcagag
gaggagctgagggaactggaggcggagggccggcggggcctggaggccaggctccagtgt
ctccagaacatccacaccctgctggacgctgccatgctcaacatccaccactacctcagc
accgtcgccacactcactcctcctcgggctgaaggcggttctggagcagccagcgagaca
aacagcacagcttcacctcctacagctggcagcagcacggacagtcccagccaggagagg
gattcctccagctctgagcaggttaacggagcgacagtgtccactcagccagctgactct
acttctgcagcctcggacacggaaagaaaagaagagtcggacgaaggagcggcgggggtt
ggggaggaggacggagagcccaacgctgctgagctgaggcgccgccgcctccgtaagctt
gagacatcgtccccatcatctccaccccctccggacaactga
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