Plectropomus leopardus (leopard coralgrouper): 121948308
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Entry
121948308 CDS
T07454
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121948308 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121948308 (cstf2)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
121948308 (cstf2)
U7-dependent histone pre-mRNA processing factors
121948308 (cstf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
121948308
NCBI-ProteinID:
XP_042349610
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All DBs
Position
9:complement(22495164..22513332)
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AA seq
500 aa
AA seq
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MANVAAAAAAAAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPYGESVQPQEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARSMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTAVPPLIPSGQGGGAAPINPPTAPPSVPVSQPQ
PVPGMHVNGAPQMMQPPTMGVVPGPMPVQGPGPVQGPGPGPGQVPVGPPGPGGIPPRGLL
GDGPNDPRGGTLLSVTGEVIDPNRGYMGAPPPHQAPPVHMPQMASGPPPDMRGPPMDMRG
PPMGEPRNMIGDPRGPPMMEPRGPPMETRGRDPRALDARVPVTGQRVPMATGMPGPVPHS
MGPNAPPPARPGPGISGVPPSGGGFSPGQSQVSTQDQEKAALIMQVLQLTPEQIAMLPPE
QRQSILILKEQIQKTAGAAP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtagcagccgctgccgccgccgccgctgccgccgctgcggccgcaaacaga
gacccagctgttgaccggtcactccggtcagtgtttgtggggaatatcccgtatgaagcg
acagaggagcagctcaaagacatcttttctgaagtgggacttgttgtcagtttcaggttg
gtatatgacagggagacaggaaagccaaagggatatggcttctgtgaataccaagaccag
gagacggccctcagtgccatgcggaacctgaacgggagagagttcagtggtcgggctctc
cgtgttgacaacgcagccagtgagaaaaacaaggaagagctcaaaagtttggggacagga
gccccgattatcgagtctccttatggagaaagtgtccagccacaggaagccccagagtcc
atcagcagagctgtggccagtctgccacctgagcagatgtttgagcttatgaaacagatg
aagctgtgtgtgcagaacagtcctcaggaggcgaggagcatgctgctgcagaaccctcag
ctggcctatgctctgctgcaggcccaagtggtcatgcggattgttgaccctgagatcgcc
ttgaaaatgctccaccgtcaaacagcagtccctcctctgattcccagcggtcagggtgga
ggagcagcacccatcaacccacctactgctccgcccagcgtgccagtgtctcagccgcag
cctgtgcctggaatgcatgtcaatggagcccctcaaatgatgcagccccccaccatgggt
gttgttcctggacccatgcctgtacaaggaccaggacctgtacagggaccgggaccagga
ccaggacaagtaccagtcggacctccaggaccaggaggtatcccccccagaggcctgctg
ggagatggtcccaatgatcccagaggaggaaccctgctgtccgtcaccggagaggttata
gaccccaaccggggttacatgggcgctccaccaccccaccaagctccccctgtacacatg
cctcaaatggcaagcggaccccctccggatatgagggggcctccaatggacatgagaggc
ccacccatgggtgaaccacgaaacatgataggtgaccccagagggcccccgatgatggag
ccccgcggacccccgatggaaaccagaggtcgtgacccgagggcattggacgctcgtgtt
ccagtgacaggccagagggttcccatggcgacaggaatgccaggccccgttcctcatagc
atgggcccgaacgctcccccacctgcaagaccgggtcctggtatctccggcgttcctcca
tcaggtggaggcttcagtccggggcagagccaggtctccacacaggaccaggagaaggcc
gctctgatcatgcaggtcctgcagctgacccccgaacagatcgccatgttgcccccagaa
cagcggcagagcatcctcatcctcaaagagcagattcagaagactgcaggagcagcgccg
tga
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