Plectropomus leopardus (leopard coralgrouper): 121948421
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Entry
121948421 CDS
T07454
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plep04515
]
121948421 (pcdh10b)
Cell adhesion molecules [BR:
plep04515
]
Cadherins
Protocadherins
121948421 (pcdh10b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
121948421
NCBI-ProteinID:
XP_042349754
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All DBs
Position
9:complement(3710071..3738259)
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AA seq
1020 aa
AA seq
DB search
MIVLLIVLCITDGVFSQIRYSVPEEADHGTLVGNIAEDLGLDLTKLASRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDREHICKQSASCQLNMEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYTVSLSE
NAPVGTLVIQLNATDLDEGLNGEIVYSFSNHISNRVKDLFSIDPRTGRIEVRGEVDFEES
SLYQIFVQAKDLGPNAVPAHCKVLVKVTDVNDNAPEITFSTVTESVSEKAAPGTVIALLS
VTDRDAEENGQIHVEILGDVPFKLKSSFRNYFTIVTDGPLNREQADSYSVTVVARDKGTP
SLAASKSIRLQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDIGQNSLISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQARDAGTPELSSNATVKV
IIVDQNDNAPLVLAPLGKNGTAKEPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPHQLYDLLIEVRDHGQPPLSSSASVLVMLVDSVAE
GRGGGERGGDAKAKDGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLNIYTCLTS
DCCLGCRSCCSRQGRARKKKLSKSDIMLVQSAGNVSGAGTAQVPVEESGSFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIVTGYTDQQPDIISNGSILSNETK
HQRAELSYLVDRPRRVNSSAFQEADMVSSKDSGHGDSEQGDSDHDATNRGHSSGADLFSN
CTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDSVPDTEVFESPEQMADKSFS
TFGKETPLSHLHHHHNHHHLLKNHHHSHQQGSLERKELEAFLPSSRAPYNPAYLTRKRVC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgcttttgattgtcctgtgcatcacggatggagtgttctctcagatacgctac
tctgtgccggaggaggcggaccatggcaccttggtgggaaatattgccgaggacctggga
ctggaccttaccaaactggcctcccgtcgcttccaggtggtgcccagctctcggacaccg
tacctggaggtaaatttagagaacggcgtgctgttcgtgaacgaaaaaatcgaccgggag
catatctgcaagcagagcgcgagttgtcagctcaacatggaggtgttcttggagaacccg
ctggagctgtttcgggtggaaatcgaagtggtggacattaacgacaaccctcccagcttc
ccggagactgacatcacagtggagatctcagaaagcgccactccgggcacccgttttccc
ctggagagcgcgttcgacccggacgttggctctaacgctttacgcacgtatgatatcact
actaacaactacttttacctggatgtgcagacccaaacggacggaaacaagttcgcggag
ctggttctggaaaagccgctggaccgggagcagcaggcggcgcacaggtacgtgctgacc
gcggtggacggcggtcagcctccccggactggcaccgcactgctcgtagtcaaagtgctg
gactcgaacgataacgtgccggtgtttgaccagcccgtgtacacggtgagcctctcggag
aacgcaccggtgggcacgctggtcatccagctaaacgccaccgacctggacgagggactt
aacggggagattgtttattctttcagtaaccacatatccaaccgcgtaaaggacctgttc
agcatagacccgcgcaccgggcgcatcgaggtgcgcggagaggtggatttcgaggagagc
agcctgtatcagatcttcgtccaggccaaggatctggggccaaatgccgtgcccgcgcac
tgtaaagtgctcgtaaaagtcaccgacgtgaacgacaacgcaccggagatcaccttcagc
actgtcaccgagtcggtgagcgaaaaggcggctcccggcaccgtcatcgcgctgctgagt
gtgacggaccgcgacgcggaggagaacggacagatccacgtggaaatcctcggtgatgtc
ccgttcaaattaaaatcctcctttaggaattatttcaccatagtgaccgacgggccgctg
aaccgggagcaagcggactcctactccgtcaccgtggtcgcacgggataaagggacaccc
tcgctggctgccagtaagtccatccgactccaggtgtccgatgagaacgacaacgcgccc
acttttacgcagcccatatatgatgtgtatgtgacagagaataacgtgccaggcgcctac
atccacgctgtgacggctctggacccggacatcgggcagaactcgctcatcagctactcc
atactcgagtgtgacatccagggcatgtcagtcaaaacctacgtgtccatcaatgaggag
acgggctacctttacgcgctcaggtcctttgattacgagcagctgaaggatttcaccttc
atggtccaggccagagacgcgggaaccccggagctctcctccaacgccacagtgaaagtc
atcattgtggatcagaatgacaacgcccccctggtgctggctcccctggggaagaacggc
acagccaaagagccgctaccccgctcagccgagccgggctacctggtgacccgcattgtg
gccatggacgcggacgacggcgagaacgcacggctgtcctacagcatccagagggggaac
gagaacggcatgttcaggatggactggaggacgggtgaactgcggactgcgaggcgcgtg
tcggccaaacgggacccgcaccagctgtacgacctgctgattgaggtgagagaccacggg
cagcctccgctgtcctccagcgctagcgtgctggtgatgctggtggacagcgtggctgag
ggccgcggcggcggggagcggggaggcgacgccaaggccaaagacggcaccctggacctc
accctcattctcatcatcgccctgggctccgtctctttcatcttcctcctggtcatgatc
gtgctggccgtgcgctgccagaaggacaaaaagctcaacatttacacctgtctgaccagc
gactgctgcctgggctgcaggtcctgctgctcgcgccagggccgggcccgtaagaaaaaa
ctcagcaagtcggatatcatgctggtgcaaagcgccggtaacgtcagcggggccggtacg
gctcaagtgcccgtggaggagtcagggagcttcggctctcaccatcaaaaccagaactat
tgctaccaggtatgtctgactccagagtctgccaaaaccgacctcatgttcctaaagccg
tgtagtccgtctaggagcacagacaccgatcacaacccgtgcggggccatagtgacaggg
tacacagaccagcagcctgacatcatatcaaacggcagcattttatcaaacgagaccaaa
caccagcgagctgaactcagctacctggtggacaggccgagacgtgtcaacagttcggca
ttccaggaggccgacatggtcagctccaaagacagcggccacggggacagcgagcagggt
gacagcgaccacgacgccactaaccgaggccattcctctggcgctgatcttttctctaac
tgcacggaggagtgtaaggccctgggccactcggatcgctgctggatgcccagcttcgtg
ccctctgacgggcgccaaggcccggactatcgcagcaacctccacgtgcccggcatggac
tcagtcccggacacagaggtatttgaaagcccagagcaaatggccgataagtcattctcc
acctttggcaaagagacgcctctcagtcaccttcaccaccaccacaaccaccaccatctt
ctcaaaaaccatcaccacagccaccagcagggctccctagagaggaaagagttggaagca
tttctgcctagctccagagcgccttataacccagcttatttaacgaggaaaagggtttgc
tag
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