Plectropomus leopardus (leopard coralgrouper): 121948515
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Entry
121948515 CDS
T07454
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b isoform X1
KO
K16499
protocadherin delta 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plep04515
]
121948515 (pcdh18b)
Cell adhesion molecules [BR:
plep04515
]
Cadherins
Protocadherins
121948515 (pcdh18b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAG
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
121948515
NCBI-ProteinID:
XP_042349855
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Position
9:2683495..2696000
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AA seq
1239 aa
AA seq
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MRAKMIQTKGNVFSSALFKLLLLVALMHGVTGKTLKYKVYEEQKVGTVIARLKEDVAGVL
SKLPSSLTFRFRAMQRGSTPFLSVREEDGEISIGTKIDREKLCEKNLNCSIEFDVVTLPT
EYLQLFHVEVEVLDINDNSPHFSRAIVPIEISESASVGTRIPLDGAVDADVGENSLHTYS
LTPNNFFKIDVRTRTDGAKYAELVVMRELDREVQSSYQLQLTASDNGVPPKSGSTLVKIS
ISDSNDNSPAFDEQAYIISLLENSPLGTLIIDLNATDPDEGTNGKIVYSFSSHVSPKILE
TFKINPENGHITLIKKVDYETTASYELDVQAQDLGPNSIPGLCKIVVKVVDVNDNKPEIN
INLMTPGKEEVAYISEGAPVDTFIALVRVDDSDAGLNGEVVCRLHGHGHFRLQKTYEKNY
MILTNVSLDREKRSEYSLTVIAEDRGSPSLSTIKHFTVQVLDENDNPPCFEKSRYEVFKS
ENNSPGAYLMTVVASDPDLGTNGQVTYTIVDALVQGSPISTYVTIDPSNGAIYALRSFDH
EDVSRIAFTVQARDGGNPVLSTNTTVLLTVLDENDNPPIIHSPSLRNHTAELPVWKYASP
GQLITALKVTDRDTGTNGEVSCAIVGGNEDGLFVMDARRCELRTNASLEQAPRDVMEIRV
EVQDRGTIRLSTGALFKLSLQETMDILPPLYPTGSSQAPLDLSLIVIISLGAVCALLLIV
MVMFATARCNREKKDPRHNYNCRVAENSYQNHPKKPARQIHKADITLVPTVNGTLPVRAH
PRSPSASPIPERGTLGSRQSHHSRQSLNSLVTISSNHVPENFALELAHATPPVEQVSQLL
SMLHQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDYEPGRESPMDR
LLGEGFTEIYAPDGQHRPHAAMRLCTEECRVLGHSDQCWMPPLASPASVSSDYRSNLYIP
GEEARQATDLSQEKTPQPCTDTGPARNQSFSTFGKDLGGEDGPEEEEEGGGECGGESRDE
DLCGTTSLLTEMSSVFQRLLPQGLDSYIQVNENQKGTSLSGVGVPMTGSLDRRRGHLPGK
PNPSVHQQGVAAWAANTHFQNPGSSIGPSGHHQAGSYHTLKPSTKLSSQSSKGSQAPKNS
PQNSGHPPKPHSSPLLTALVSPTLVQVSPAPVAVPVALPGPSSKWLPAMEEIPENYEEDD
FDSVLSHLQGKRSDSRHELVDASELVAEINKLLQDVRQS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcaaaaatgatccaaaccaaaggaaatgtattctcttcggcactatttaaacta
ctgcttttggtcgcgcttatgcacggcgtcaccggtaagactttgaaatataaagtttac
gaggagcagaaagtgggcacggttattgcacggttaaaggaagatgttgctggggtttta
tccaaactaccgagttctctgacctttcggttccgcgctatgcaacgagggagcacgcca
ttcctgtcggtccgggaggaggacggagagatcagcattggcaccaaaatcgaccgcgag
aagctttgtgagaaaaacttgaactgctcaattgaattcgacgtggtcacgctccccacg
gagtacttgcagctgtttcatgtggaggtggaagtactggacattaacgacaactccccg
cacttctcccgcgccatcgtccccattgagatctcagagagcgcgtctgttgggacgcgc
atccctctggacggcgccgtggatgcggacgtcggggaaaactccctgcacacatactcc
ctgacacccaataacttctttaagatcgatgtgaggaccaggacggacggagccaagtat
gcagagctggtggtgatgagggagttggatcgggaggtgcagtccagctaccagctgcag
ctcaccgcctcggataatggtgtgcccccaaagtctggctccactctagtcaagatcagc
atctcggattccaacgacaacagcccagcctttgatgagcaggcttatattatcagtttg
ctggaaaactctccccttgggactctaatcattgatctaaacgccacagatccagacgag
ggcactaatgggaaaatagtctactctttcagcagccacgtctcgccaaagatcttggaa
acatttaagataaacccagaaaatggtcacattacacttattaaaaaagtggactatgaa
accactgcttcctatgagctggatgttcaggctcaggacttgggccctaattccattcct
ggactttgcaaaattgtggttaaagtggtggatgtaaatgacaacaaaccagagataaac
atcaacctgatgacgcctggcaaagaggaggtggcctacatttcagaaggcgccccagtg
gacactttcatagctctggtgcgtgtggacgacagtgatgctgggctcaatggcgaggtg
gtgtgcaggctgcacggccatggccacttcaggttacagaagacctacgagaagaactac
atgatcctcaccaacgtctccctggacagggagaagagatcagagtacagtctgacagtc
atagcggaggacaggggctctcctagcctctccaccatcaaacacttcaccgttcaggtg
ctggatgaaaatgacaatccgccgtgttttgagaagagccgttatgaggtctttaaatca
gagaacaactctcccggagcctacctgatgaccgtggtggcctcagatcctgatctgggc
accaatggccaggtcacctacaccatcgtagatgctctggttcaggggagccccatctcc
acctacgtcaccattgacccttctaatggtgccatttatgccctacgtagctttgaccat
gaagacgtcagccggatcgccttcacagttcaggcacgtgacgggggaaaccctgtgcta
tcaactaacaccactgtcctgctgactgttctggatgaaaatgataacccgccaatcatc
cactccccctccctccggaaccacactgctgagctgccagtgtggaagtatgcatcacct
ggtcagctgatcaccgcactcaaagtcacagaccgggacaccggcaccaacggagaagtt
agctgcgccatcgtcggtggcaacgaggatggactttttgtgatggatgctcggcgatgt
gagctcagaactaacgccagcttggagcaggctccacgggatgtgatggaaatcagggtg
gaagtgcaggacaggggcaccatccggctgtccacaggggccctcttcaagctctccctg
caggagactatggacatccttccccctctttatcccactggctccagccaggcccccctg
gatctctcccttattgtcatcatctctctgggtgccgtttgcgctctgctgctaatcgtc
atggtgatgtttgccactgcccgttgcaaccgggagaagaaagaccccagacacaactac
aactgccgtgtggcagagaacagctaccagaaccaccccaagaagcccgccaggcagatc
cacaaggcggatatcaccctggtcccgaccgtcaacgggactctgcctgtacgggcccac
ccacgctccccctcagcctcccctatacctgagaggggtacccttgggagcaggcagagc
catcacagccgccagtccctcaacagcctggtcaccatctcctccaatcatgtgccggag
aactttgccctcgagctggcccatgctacacctcctgtagagcaagtttcacagcttctg
tccatgctccatcagggccagtaccagccacgaccaagcttcagaggcaacaaatacacc
aggagctacagatatgccctaaacgagatggataaattcagtctgaaggacagcggtcgt
ggagacagcgaggctggggacagtgactacgagcctggcagggagtcacccatggatagg
ctccttggtgagggctttactgagatatatgcccctgatggccagcacagaccgcatgca
gctatgagactgtgcacagaggagtgtcgtgtcttgggtcactcggatcagtgctggatg
ccccccctggcctccccggcctcggtctcctccgactaccgcagcaacctctacatcccc
ggggaagaagcccgccaagcgactgacctctcccaggagaagacaccgcagccctgcact
gacaccggcccagcccgcaaccagagcttctccaccttcggcaaggacctggggggtgag
gacggtccggaggaggaggaggaggggggaggggagtgtgggggcgagtccagagatgaa
gacctgtgcgggaccacgtcgttgctgacggagatgagcagcgtgttccagaggttgctc
ccccagggtctggactcgtatatccaggtcaacgagaaccagaaggggactagtctgagt
ggggtgggggtacccatgactgggtctttagatcgcaggaggggccacctccctggcaag
cccaacccctccgtgcaccagcagggcgtggcagcctgggccgccaacacccacttccag
aacccgggaagcagcatcggcccgtcggggcaccaccaggctggcagctatcacaccctg
aaacccagcaccaagctcagctcccagagcagcaagggctcccaggcgcccaaaaacagt
cctcagaacagcggacacccgcccaaaccccacagcagccccctcctcactgcactcgtc
agccccactctagtgcaggtgtccccggccccggtggcagtgcccgtggcgctccccggg
ccctcctccaagtggctcccagccatggaggaaataccagagaactacgaggaggacgat
tttgactctgtgctcagccaccttcagggcaaacgtagcgacagccgccacgagctggtg
gatgccagcgagctggtggctgagatcaacaaactcttacaggatgtccggcagagctag
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