Plectropomus leopardus (leopard coralgrouper): 121948549
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Entry
121948549 CDS
T07454
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121948549 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plep01009
]
121948549 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plep04515
]
121948549 (pcdh11)
Protein phosphatases and associated proteins [BR:
plep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121948549 (pcdh11)
Cell adhesion molecules [BR:
plep04515
]
Cadherins
Protocadherins
121948549 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
121948549
NCBI-ProteinID:
XP_042349897
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All DBs
Position
9:complement(18800555..18948751)
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AA seq
1266 aa
AA seq
DB search
MDLASQAYVVVLLTCVVVLCRAQERDYTVKEEQPENVRIGNLRKDLDLNLDPNIRLSSPL
QFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFAEKRCYYEIEVAVLPDEIFR
LVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVKS
VSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTISD
VNDNRPVFKDSELEVTVPENAPMGTSVAQLHASDADLGSNAQIHFAFSNQISASTKRHFA
IDSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPSIDTRYII
NLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLETA
APLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENNDP
STQLIKISATDADSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTVI
ARDNGSTSLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGD
NAIITLSVLNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVTI
NVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSIII
TSRVSPRGLFAIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQPESLHAIALIHLFVND
TVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTALV
RCRQTPRHKVVQKGKQSGEWVSPNQDNRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDPT
HEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVA
PKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQITTRQNLSQT
PEKSFHSPPPICPHKEACQLGKITSVNTQRRVTFHLPDGSQESCSDSGLGDPEPSSTAST
TQPLPLSFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGHS
DSCWMPPALAQFQGSGSNSPTSTPITTAIAGTMPSFGFQQSCARGAKANMVSMGVMDGRH
TLGRSVPKKDELDKGINRPQFYNTLDRHCSKKEDPVKVIPLASFSSPGQQTPTGGGSSSF
LHEHQL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcaagtcaggcttatgtggtggtcttgctcacctgtgtggtcgtgctatgt
cgggcccaggagagggactacacggtgaaggaggagcagccggagaacgtccgcatcggg
aacctgcgcaaggacctcgacctcaacctggaccccaacatcaggctatcctcgccgctg
cagttcaaacctgtgtacaagacaggtgacgtgcctttggtgagggtggaggccaacacc
ggggagatctttaccaccaatcacagaattgaccgggagaagctgtgttcaggggtcttc
gctgagaaacgctgctactatgagattgaggtggccgtgctgccagatgagatcttccga
ttggtcaagatccgcttcctgatcgaggatgtaaatgacaacgcacccctattccagtcc
actgtaataaacatctccatcccggagaacacagccatcaacacccgatacccggtgccc
tcagcgtttgaccctgatgttgggatcaatgggattcaacattatgaactggtcaagagt
gtcagcgagtttggcttagacatcattgagactcctgaaggtgacaagtggccgcagctt
atcgtgcagcagaacctggatcgtgagcagaaggacacctttgtcatgaagattaaggtg
gaagatggtggcaaccctcccaagtccagcactgccatcctccaagtcaccatctctgat
gtcaacgacaatcgccccgtcttcaaggacagcgagctggaggtcaccgtgccagagaat
gcacccatggggacatctgttgctcagcttcatgcctcagatgcagacctgggttccaat
gcacagatccacttcgccttcagcaaccagatctctgcctcaaccaaacgtcactttgcc
atcgacagctctacgggactgatcactgtgaagcagccactggacagggaggtaactcct
gttcacaaactcatcgtccttgccagcgatggcagctccaccccctccagagccaccgtg
attgttaacgtaacagacgttaatgataatgttccctccatagacactcgctacattatc
aacctggttaatgggactgttctgctgtctgaaaatgcgcctctcaacaccaaaatagcc
ctcatcactgttaccgacaaggatgcagatctttatggcaaagtggcttgctacactgac
catgacgttccttttcggttgaagcctgtctttaatgatcaatttttactagagacagct
gcccccctagattatgagacgactcgagaatatgcaattaagatagtggcctcggatagg
gggacgcctcctttgaacacttcagctatggttttaattaaaatcaaggatgagaacgac
aatgcacccatcttcccccagccagaaatccaactttccataccggagaacaatgacccc
tctacacagttaataaaaatcagcgccactgacgcagacagcggacataatgctgagatt
atttatactcttggccctgatgcgcctgacgggtttaacatagacagacggtcaggaatt
ctctcagttggcaaacgactggacagagagaagcaggaaaggtactcattcactgtcata
gcgagggacaatggctccacgtccctgcagagcaatgtcactgtcaggctaatcgtccag
gaccttaatgacaacagcccagcttttacacaccctgagtacaacttctatgtgcctgag
aacctgcctctttatggaactgtgggtttaatcacagtgacggatgcagatgctggagat
aatgcgattataaccctgtctgttttgaatgggaaagacaatttcatcattgacccccaa
accggcgtgatcaaacccaatattacctttgacagggagcagcaaagctcctacacattc
atggtcaaggcagtcgatggggggcagcctccaagctcctcctacgccaaggtcactatc
aatgtggttgatgtgaacgacaatcgccctgtgttcgtcatcccatcctccaattactcc
tatgacctagtgcgaaccaccaccacccccggcgctgtggtcaccagagtgttcgccatt
gacaatgacacaggtatgaatgctgagctgcagtacagcattatcagcagcatcatcatc
acatctagggtctcccctcgaggtctcttcgccatcgacaaaacaacgggtaacataaca
ctgcaggagaaaatagtggcggctgatcagggactgcataggctggtcgtcaaggtcaaa
gatctaggtcagcctgagtcattacatgccatcgcacttattcacttgttcgtcaatgac
actgtgtcaaatgctacctttatccaagagcagctgcgaaaaagtatggagacacccttg
gatcgtaacataggggacagcgaggtaacacctcaagccaacggatatgtgattgttgtg
atcgcgatcatcgcagggaccatgactgtcatcttggtgatatttgtgactgccttggtg
cgctgcagacaaacacccagacacaaagtggtacaaaagggcaagcagagtggcgagtgg
gtgtcacccaaccaagacaaccgtcagatcaagaagaagaagaagagaaagaagcgatcc
ccgaagagtctcctcttgaactttgtgaccatagatgaatccaagcctgacgaccccacc
catgagcatgttaatggcacactggatctccctgtggagttagaggagcaaaccatgggg
aagtacaactgggccaccacgcccaccaccttcaaacccgacagcccagatttagccaag
cattacaagtccgcatcccctcagcctacatttcaaatcaaaccggagactccagtggcc
ccgaagaaacaccatgtgatccaggagctccccttggacaacacgttcgtggtgggctgt
gactcactctccaagtgctcatcgactagctccgacccgtacagtgtctcagagtgcagc
tgtcaggggggattcaagactgcggggcaaatcaccacccgacagaacctgagccagaca
ccggagaagtcttttcactcgccgccccccatttgtcctcataaggaggcctgtcaactt
ggcaagataacctctgtgaatacccagcgccgtgtgacgttccatcttccagacggttcc
caggagagctgcagtgacagcgggctgggagacccggagcctagcagcacggccagcaca
acccagcctcttcccctcagcttcccccaggaggagtactatgagcaaacatcacctaac
agccgcaccgagggagatgggaactcagaccctgaatccaccattgaggtgaacctgcaa
aaagccctggctgaggcctctgagacctgtacccaggagtgtctgatactgggccactcc
gacagctgctggatgcccccggccctggcccagttccagggttctggaagcaacagcccc
acctccacccctatcaccaccgccatcgccggcacaatgccctcttttggcttccagcag
agctgcgcccggggagccaaagctaacatggtaagcatgggggtcatggatggtcgccat
accctgggcaggtccgtgcccaaaaaggatgaactggacaaagggatcaaccgaccgcag
ttctacaacaccctggatagacactgcagtaagaaggaggaccccgtcaaggtcatcccc
ctggcgagcttctcctcccccgggcagcagacgcccactggcggaggcagcagctcgttc
ttacatgagcaccagttgtaa
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