Plectropomus leopardus (leopard coralgrouper): 121948837
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Entry
121948837 CDS
T07454
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04382
Cornified envelope formation
plep04510
Focal adhesion
plep04512
ECM-receptor interaction
plep04514
Cell adhesion molecules
plep04810
Regulation of actin cytoskeleton
plep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121948837 (itga6a)
04514 Cell adhesion molecules
121948837 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121948837 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121948837 (itga6a)
04810 Regulation of actin cytoskeleton
121948837 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121948837 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121948837 (itga6a)
04515 Cell adhesion molecules [BR:
plep04515
]
121948837 (itga6a)
04090 CD molecules [BR:
plep04090
]
121948837 (itga6a)
Exosome [BR:
plep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121948837 (itga6a)
Exosomal proteins of breast milk
121948837 (itga6a)
Cell adhesion molecules [BR:
plep04515
]
Integrins
Integrin alpha subunits
121948837 (itga6a)
CD molecules [BR:
plep04090
]
Proteins
121948837 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
121948837
NCBI-ProteinID:
XP_042350252
LinkDB
All DBs
Position
10:18138067..18162620
Genome browser
AA seq
1089 aa
AA seq
DB search
MLLLQGGPSAVYALLFFLLEPTLVVAFNLDTSHVIRKDGEPGSLFGFSLAMHRQLNPDKR
MLLIGAPRARALGKQTANITGGLYKCEITQTNDCERIEFDSEEDVRVENKENQWMGVTVQ
SQGPGGKIVTCAHRYQRRLFVNTPQESRDITGRCYVLSQDLSIDSSSDEDGGNWNFCEGR
ARGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEMGIYDDGPYE
VGDEHHLNPELVPVPANSYLGFSLDSGHSITHTRGLTVVAGAPRANHSGAVVLLRKESEA
SGRLLVEHTLHGPGLASSFGYDVAVVDLNGDGWQDVVVGAPQFYMKEGDVGGAVYVYINQ
AGRWDRITPIRLNGTKDSMFGLAVENIGDINQDLYEDIAVGAPYDDGGAGKVYIYHGSAG
GIKTSPAQILSGKKHNMQLFGYSLAGNMDLDGNSYPDIAVGSLSDTALIYRARPVISIRR
DVKITPHEIDLTIKTCGNSICLTVDACFTYKANPASYNPRLTVRYSVDADGVRRKQGLPS
RVRFLNKTRTETDYQFNGTLDLRGQNQKTCIKIAAELKDNIKDKMRSIPIEVSAEIVGTK
RQKTKNSLPQLMPILDSSQPSKDVFEVNFVKEGCGSDNVCRSNLKMEYKLYYKQSNLDVY
SPLHTKNNIPVFHLSYERKDLAVHVTVDNMNADDAYEAKLVGTFPDTLSYSGVRSHQTTA
EKPIICTANQNGSQADCELGNPFKRDSKATFYIILNTDGMSLDTTETEIDLQLQTTSVQD
DLAPVKVKVKVIIELPLSVSGEASPNQVSFGGVVKGESAMKTEEEIGSLIGYTFRINNLW
KSLKSSVKASLHIQWPKFNKDGKWLLYLVKITSTGPEKVLCSPESEINSLKHIQESSASR
KKRELGERKAVGKMSSLSGKRKVLTCDSEIRCVVLKCPLQGLDGTAVELRSRLWNSTFIE
DYASLSNVHIIVKASLVLHTQAKNMILRTPHSDVIVSVSPEGAVAQHSGVPWWIILVAVL
AGILILALLVYLLWKCGFFKRSKQEDSVPRYHAVRIKKETPEYKDGKVKLDPFEKKQWMT
TWIDDESYS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgcagggaggaccctctgctgtttatgcacttttatttttcctcctggag
ccaactttggtggtcgccttcaacctggacaccagtcatgtcatcaggaaagacggagag
ccggggagcctgttcgggttttctctggccatgcaccggcaactcaacccagataagcgc
atgctgttgattggagcccccagagccagagcgttggggaaacagacagccaacattaca
ggaggcctttataaatgtgaaatcactcagaccaatgattgtgagcgcattgaatttgac
agtgaagaggacgtacgtgttgagaacaaggagaatcagtggatgggggtgacagttcag
agccagggacccgggggaaagattgtgacttgtgctcatcgctatcagaggcgcttgttt
gtgaacacacctcaggagtcccgggacatcactgggcgctgttatgtcctgagtcaggac
ctgtccatcgactcgtcctctgatgaggacggaggtaactggaatttctgtgagggcaga
gccagaggccacgagatgttcggatcctgccagcagggtttggctgccaccttcaccaag
gactaccattatgtggtgttcggagcaccaggagcttacaactggaaaggcattgtacga
gtggagcagaagaacaacactttgctggagatgggaatatatgatgatggcccatatgaa
gttggagatgagcatcacttgaaccctgaacttgtgcctgtaccagccaatagctacctc
ggattctccctcgattctggacacagcatcacccacacacgtggcctgacggtagtggct
ggagcaccccgagccaatcacagtggagcggtggtccttctgaggaaggagagcgaagcc
tccggcagacttttggtggagcacactctgcacgggccaggactcgcatcctcatttgga
tacgacgtggctgtggttgacttgaatggtgatggatggcaagatgtagttgtaggagcc
cctcagttctacatgaaggagggagatgttggaggagctgtttacgtctacatcaaccag
gcaggaaggtgggacagaatcactcctattcgtctaaacgggaccaaagactcgatgttt
ggactggcggtagagaacattggagacatcaatcaagacttatatgaagatattgccgta
ggagcaccttatgatgacggcggtgcaggaaaagtctacatttatcatggctctgcagga
ggaatcaaaaccagtcctgcacagattctctcaggaaaaaagcacaacatgcaactcttt
ggatattctctggcggggaacatggatctggacggtaactcctatccagacattgctgtc
ggctctttgtcggacacagctctgatctaccgggcacggccagtcattagcatcaggaga
gatgtcaaaataactccacatgaaattgaccttacaatcaaaacatgtggcaatagcatt
tgcctcactgtggatgcgtgcttcacctacaaagcaaaccctgcatcttacaacccaaga
ctaactgttcgctattctgttgatgcggatggagttcgcaggaagcaggggctgccctcc
agagtgaggttcctcaacaaaacacgcactgaaacagactaccagtttaacggcaccttg
gacctccgcggccaaaaccagaaaacgtgcattaagatagcagctgaactaaaggacaac
atcaaggacaagatgcgtagcattcccatcgaggtgtctgcagaaattgtgggtactaaa
cgacagaagacgaagaacagccttcctcagctcatgcccatattagactcctctcaacca
agcaaagatgtctttgaggtcaactttgtaaaagagggatgtggaagtgataatgtttgc
cggagtaacctgaagatggagtacaagttatactacaaacaaagcaacctagacgtgtac
tccccgttacacaccaaaaacaacatccctgtgttccatctgagttacgagaggaaggac
ttggctgtgcatgtgacggttgacaacatgaacgcagatgatgcttatgaggcaaagctg
gttgggactttcccagatacactgtcatattctggagtccgctcacatcagaccacggcg
gaaaagccgatcatctgcacagccaatcagaacggctctcaagcagactgtgagctgggg
aatccttttaagagagactcaaaggctacattttacatcatcctgaacactgatggtatg
agtcttgacaccacagagactgaaatcgacctgcagctccagacaactagtgtgcaggac
gatcttgcccctgtgaaagtgaaggtgaaagtaatcattgaactgccattgtcggtcagt
ggggaggccagccctaatcaggtttcttttggaggtgttgtgaagggtgaaagtgccatg
aagacagaagaagagattggaagtttgattggatatactttcagaataaacaacttgtgg
aagtctttgaagtcttctgtcaaagcctcacttcacattcagtggcccaaattcaacaaa
gacggtaaatggcttctgtacttggtgaagatcacctctacaggaccggagaaagtcctc
tgctctcctgagtctgagatcaactctctcaaacacatccaggagtcctctgcatccagg
aaaaaacgagaacttggagaaagaaaagccgttggcaaaatgtcttcactgtcaggcaaa
agaaaagttttgacgtgtgacagtgagatcagatgcgtggtgctcaagtgccccctgcag
ggtttggacggtacagcagtggaactgaggtctcgtctctggaactcgacctttattgag
gactacgcctctctttcaaacgtgcatatcatcgtgaaggcctcgctcgtcctccacact
caggctaaaaacatgatcctgagaactcctcacagcgatgtgattgtgtcggtgtcccct
gaaggtgcggtagcgcagcacagtggagttccctggtggatcatactggttgctgttctt
gcaggcatcttgattttggctttgttggtgtatctgctgtggaagtgtggattctttaaa
cgctccaaacaagaggacagcgtccctcgttaccacgcagtgcggataaagaaggaaact
cctgaatataaagacgggaaagtcaaactggatccttttgaaaagaagcagtggatgaca
acttggatcgacgatgaaagttactcatga
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