Plectropomus leopardus (leopard coralgrouper): 121948858
Help
Entry
121948858 CDS
T07454
Symbol
itga4
Name
(RefSeq) integrin alpha-4 isoform X1
KO
K06483
integrin alpha 4
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04510
Focal adhesion
plep04512
ECM-receptor interaction
plep04514
Cell adhesion molecules
plep04672
Intestinal immune network for IgA production
plep04810
Regulation of actin cytoskeleton
plep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121948858 (itga4)
04514 Cell adhesion molecules
121948858 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121948858 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121948858 (itga4)
04810 Regulation of actin cytoskeleton
121948858 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121948858 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121948858 (itga4)
04515 Cell adhesion molecules [BR:
plep04515
]
121948858 (itga4)
04090 CD molecules [BR:
plep04090
]
121948858 (itga4)
Exosome [BR:
plep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121948858 (itga4)
Exosomal proteins of other cancer cells
121948858 (itga4)
Cell adhesion molecules [BR:
plep04515
]
Integrins
Integrin alpha subunits
121948858 (itga4)
CD molecules [BR:
plep04090
]
Proteins
121948858 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF11
FAM165
Motif
Other DBs
NCBI-GeneID:
121948858
NCBI-ProteinID:
XP_042350303
LinkDB
All DBs
Position
10:26687168..26710364
Genome browser
AA seq
1026 aa
AA seq
DB search
MHPSAGSLWLFCSLILVLVHPAAGYNLDQEHSLEFSGPPSSMFGYSVLLHHHGAHSWLVV
GAPVANSSSRPSVRSPGAIYRCNITAHSHRCHPMHADVHTCGKTCDAESDHQWLGVSLSR
QPGDNGGHILACAHRWKNVFYSKKDGQNHKLPHGVCYRYGSDLRNAQPIIPCYRDHRRKF
GEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVFNTSSRGMSVYLDDAASTVSFGSY
LGYAVGAGHFLSPSSVEVVGGAPQYNQKGKVFIFAVESSILQVVSEVSGKELGSYFGSSV
CAVDLNADGLSDLLVGAPMETGVTREEGRVHVYINQGQAKLLEAEFQLTGSNAYAARFGE
TIADLGDLDDDGYHDVAVGAPQEDDLKGAVYIYNGRKEGISPTPSQRITGSTLGRDLRMF
GQSLSSGIDIDANGYHDVAVGAFLSDSAVVLRTRPVIQVTASLTLPKQIDQRVALCHDHK
TPAVCLNVTVCFSVNSRHFKGAIDLQYNLTSDLLHKPSFPHRFYFHGNGSSNSTKGRVRA
RHGQLTCTTHVAYQRKDVRDIFTPVKFEVSYSHRETNSHRGSPKTFPPLKPILQQSAGHQ
NTITNQTWFARSCSLVNCSTNMQLSAQLVLPHQQQYFPLGSGQTIMLKTSLLNSGDDAFL
PRLTLRFPNNIHYIKVLQNQDNVVSCDVTQGVSNTTAGVDCSVTSLLLSAHAQLNISFLL
DVNQNSTPGDIIIHANTESDNFEKEEYLHDNSISLPLPLKYGVNVNIHGFVTPTSFVFGD
EDTTPVDCYTERFNYTYTVLNSGPSRSLDTVVDIRLPKILTPYRHRLLQVVEWQTSQGVC
SISDATVSVVEDCDVPPASFIKQLVFFFSSTSTRRMFCGHGDDLCERLVCRLGDLDVGKE
TLIQLEIKLNPAVLLQAPGRHGVMRLESMAMMSNPRESPHTILIHEQPVAEVVVEAIFTQ
KPSATVKVFIIVVSLVLGLLILAALIWCLWKAGFFKREFQKKKEEEEFKRDSWDYVPKNE
KRESTS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcatccctcagcagggagcctgtggttgttctgcagcctgatcctggtcctggtccat
cctgcagcagggtacaatctggatcaggagcacagtctggagttcagtggccccccctcc
tccatgtttggatactcagtcttgctgcatcaccatggagcccacagctggttggtcgtt
ggtgccccagtggctaactcgtcctcaaggccgtcagttcgatctccaggagccatttac
cgctgcaacatcactgctcattcccatcgctgccaccccatgcatgctgacgtgcatacc
tgtgggaagacgtgtgatgcagagagtgatcaccagtggctgggagtcagtctgtccaga
caacctggagacaatggaggacacatcctggcgtgtgctcaccgctggaagaacgtcttc
tactcaaagaaagacggtcagaaccacaagctgccgcatggtgtctgttatcgctatgga
agtgacctgagaaacgcccaacccatcatcccgtgctacagagaccaccggaggaagttc
ggcgaggattatgggtcgtgtcaggctggtatttccaacttcctgacagaggatttgatc
attatgggggctccggggacatcttattggactggttcggtcctggtcttcaacacgtcc
agcagagggatgtccgtgtatttggacgacgccgcctcaaccgtcagctttggaagctac
ctgggttacgccgttggagctggtcactttctgagtccctcctctgtggaggtggtggga
ggagctccgcaatacaaccagaagggcaaggtctttatctttgccgtcgaaagctctata
ctgcaggtcgtctctgaagtgtctggaaaagagctgggatcttacttcggctccagtgtg
tgtgcagtggatctgaatgctgatggtttgtcggatctgttggttggtgctccgatggaa
acaggcgtcaccagggaggagggaagagtccatgtatacatcaaccaggggcaggcgaag
ctgttggaggcggagtttcagctgacaggcagcaacgcctacgctgcccggtttggagag
accattgctgacctgggagaccttgatgacgacggttaccacgatgtggcagttggcgcc
ccacaggaagacgatctcaaaggagctgtttacatttacaacggcaggaaggaaggcatc
tcaccaactccatctcagaggattactggatccacactgggtcgtgacctcaggatgttc
ggccagtccctgagctctggcattgacattgatgctaacggctaccatgatgtagcagtc
ggtgctttcctctctgactcggccgtggttctcaggactcgtccggtgattcaggtcact
gcgtctctgactctgcctaagcagattgaccagcgggtggcgctgtgccacgaccacaag
actccagctgtctgcctcaatgttaccgtctgcttcagtgtaaactccagacactttaaa
ggagctatagatcttcaatataatttgacctctgacctcctccataaaccatctttccct
catcgtttctatttccatgggaacggatcatccaatagcactaaggggcgcgtgagggca
cgacatggccagctcacttgtacaacacacgtggcttaccaaaggaaagatgtgagggac
atttttactccggtcaagtttgaggtttcctacagtcacagagaaacaaactcccacaga
ggctctcccaaaactttccctccattaaaaccaattctgcagcagagcgcaggacaccag
aacaccatcaccaaccagacttggttcgctcgttcctgttcgctggtgaactgttcgacc
aacatgcagctgtctgctcaactagtgctgccacatcagcagcagtactttcctctcggc
tctggacagaccatcatgttaaaaacctcgctgctgaactctggagacgacgccttcctg
ccgagactgacgctgcgtttccccaacaacatccattacattaaagtgctgcagaaccag
gacaatgtggtcagctgtgatgtcacacagggggtcagcaatacaacggcaggtgttgac
tgcagtgtcaccagcctcctgctctcagctcacgcccagctaaatatcagcttcctattg
gacgtcaaccagaacagcacacctggtgacatcatcattcatgccaacaccgaaagtgat
aactttgagaaggaggagtatctccatgacaactccatcagtctcccccttcctctcaaa
tatggagtcaacgtaaatatccacggttttgtgactcccacttcatttgtgtttggcgat
gaagacacgactccagttgactgctacactgaaagattcaactacacatacacagtgtta
aactctggtcccagcaggtctctagatactgtggtcgacatcaggttaccaaagatcctc
acaccttaccgacacagactgctacaggtggttgagtggcagacgtctcagggtgtgtgt
tcgattagtgacgcaactgtttcagtcgtcgaggactgtgacgtccctccagcttccttc
atcaaacagctcgtcttcttcttctcctccacctctacacgcagaatgttttgtggccat
ggtgacgatttgtgtgagcggctggtgtgtcgtctcggtgatctggatgtgggaaaggaa
actctcatccaactggagatcaaactgaaccctgctgtgcttctgcaagctccgggtcgt
cacggtgtcatgaggttggagagcatggcaatgatgtcaaatcccagagaaagtcctcac
acaatcctcatccacgaacaacctgtagcagaggtggtggtggaggctatttttacccag
aaaccctcagcaacagtaaaggtctttatcattgttgtcagtttagttttgggtctgctg
atcttggctgctctcatctggtgtctgtggaaggctggtttctttaagagggagttccag
aagaagaaggaggaagaggagttcaagagggacagctgggactatgttcctaaaaacgag
aaacgagagagcacttcctaa
DBGET
integrated database retrieval system
