Plectropomus leopardus (leopard coralgrouper): 121948952
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Entry
121948952 CDS
T07454
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plep03036
]
121948952 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plep04812
]
121948952 (clasp1a)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121948952 (clasp1a)
Cytoskeleton proteins [BR:
plep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
121948952 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Adaptin_N
Cnd1
Sec7-like_HUS
ParcG
HEAT_DAAF5
MMS19_C
TAN
Paxt-1_C
Motif
Other DBs
NCBI-GeneID:
121948952
NCBI-ProteinID:
XP_042350445
LinkDB
All DBs
Position
10:complement(3290074..3405919)
Genome browser
AA seq
1645 aa
AA seq
DB search
MTEPSMENCLAQVLQKDMGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV
NSSNFKVALLGLDLLSALVTRLQERFRAHVGTVLPSLIDRLGDSKDQVREQDQTVLLKIM
EQAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLSTYGAQGLTLSKIVPHICNLLGDP
TSQVRDGAMSCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSKFDEVQRSGNMISSSGSD
KNFEDEDSVDGGRSSSSSSSKAPPSGRRTVVSSVRRPSSATSAKASGKEAGAGAVDEEDF
IKAFEDVPSVQIYSNRELEDQLTKIREVLSDDKHDWEHRVVALKKVRSLMLAGATEYESF
PQQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSILGNKFDHGAESVMPTLLNLVPNSA
KVMATSGVATIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTNTLER
HVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLKS
SDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSITRSKLVSTRVPTTPGSLQRSRSDID
VNAASNAKSRLSTVPASSPFSSAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGAST
SSVVDSRGRSRAKVVSQSQRSRSANPINAGSRSSSPGKLLGHSSYGRIPRATMSATSTPA
DKRSRIPRSQGCSRETSPSRLGLASLCGKVLLPAALPYRTLARSRIPRPSMSQGCSRDTS
RESSRDTSPARGFTPLASRRHSRSTSALSTADPHSQSDRYGLIHQARISASVNAMRVLNT
GTEVEAAVADALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYGSRNGGIP
HYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADP
HSKRVFSMFLETLVDFITVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRE
SFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRII
TWTTEPKSSDVRKTLQNWVSEELAGRSSSAALLSAEGNQEERCKQAAQVVLIALFELNTP
EFTMLLGALPKTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGRTPTRHTPSRTSPLTSP
TNCSHGGLSPSRLWGWGVDGLSKHPPAPPPPPPHSTPAAPSLRVLRRAYSPSMMEYDTEN
MNSEEIYSSLRGVTEAIQSFSYRSQEDLNEPIRQEGKRDDAAGREGVASSPGSDARLGLD
MVEGGRTALDNKTSLLNTPSPRSFSGPRSREFAPYGYGETICTYDKSALKEAVFDDDVEQ
FRDCRRQESGENKMTLPKVFAPVGQDHSDLVADLLKELSNHNERSEERKGALVDLLKITR
EDSLAVWDEHFKTILLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTL
EAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERI
TKDSLLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKL
LNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacccagcatggagaactgcctggcccaggtcctgcagaaggacatgggtcgc
cggctgcaggtggggcaggagatcattgattacattttggacaaggagaagtcccacgac
ctggagcaggatcagactgcactggacaagatggtggacggcatcgccagctcctgggtc
aactccagcaacttcaaggtggctctgctcggcctggacctcttatctgccttagtgacg
aggttacaggagcgcttcagggcccatgtgggaacagttctgcccagccttatcgatcga
ttgggagattctaaagaccaagtacgagaacaagaccaaacagtgctgctaaagatcatg
gagcaagctgccagcccgcagtatgtgtgggacagaatgctgggaggtttcaaacataag
aacaacaggaccagagaaggagtgtgcctttgcctcatcgccacgttgagcacatatgga
gctcaaggcctgacgctcagtaaaatagttccccacatatgtaacctcctcggggacccc
acgagtcaggtgcgtgatggagccatgagctgcctggtggagatttacagacatgtggga
gagcgggtgaggatggatctcagcaaaaaaggcctgccacagtcacggttgaatgtaatc
ttcagcaaatttgatgaagtccaaagatccgggaacatgatctcatcctctggctcagat
aaaaactttgaggatgaagactctgtggacggaggccggtcctcctcctcttcatcatcc
aaagcgcctcccagtggcaggaggactgtagtgagctctgtgagacgacccagctcagcc
acctcagctaaggcttcaggtaaagaagcaggtgctggcgctgttgatgaagaggatttc
atcaaagcctttgaagatgtgccctcagtgcagatctactctaacagagagctggaggat
cagctgactaagatcagagaagtgctgtctgatgacaagcatgactgggagcaccgagtg
gtagcgctgaagaaggtccgttccctcatgctggccggggcaactgagtacgagagtttc
cctcagcagctgcgtctcctcgaggctcccctcaagctgtcagctaaagacctgcgctca
caggtggtccgcgaggcctgcatcacactgggacatttatcatcaatactgggcaacaag
tttgaccatggagcggagagcgtgatgcccacactgctgaacctcgtgcccaacagtgcc
aaagtcatggccacgtctggagtggccaccatccgcctcatcctcaggcacacacactac
cctcggctcatccctatcatcaccagtaactgcacctccaaatcagtggcagtcagacga
cgctgttatgagttcctagacctcatgttacaagagtggcacactaatacactggaaaga
cacgtggctgttctgactgagaccatcaagaaaggcatacatgatgctgactccgaggcc
agatccatagcaagaaagtgctattggggtttccatggtcactatagtcgggaggcagag
catctgttccaggcgctggagtccacctatcagaaagccctccagtcccacctaaagagc
tctgacagcatcgtgtctctaccgcaatctgaccgatcctcatcgtcttcccaggagagt
ctgaaccggccgctgtccgtgaagagtgtcattggagggagcataacaaggagtaagctg
gtgagcaccagggtgcccactacaccgggttctctccaacgttcccgtagtgacatcgat
gtgaatgccgcatccaacgccaagtcacgcctgtccaccgtccccgcctcctcaccgttc
agctccgcagctgccctgcccccagggtcctacgcctcattagatggcactcctggtaaa
agcgatggtcgtgttcgcaccaggcggcaaagctcgggcagcgtgggcggagccagtacc
tcctcggtggtggacagtagggggcgcagccgagccaaagttgtctcccagtcccagcga
tccagatcagccaatcccatcaatgccggcagtcgctccagctccccaggcaagctgctt
ggccacagcagctacggccggattccacgagccacaatgtcggccaccagcactccagca
gacaagcgcagcaggatccctcgcagccagggctgcagccgcgagaccagccccagccgg
ctgggccttgccagcctgtgtggtaaagttcttcttcctgctgctcttccctaccgcacg
ctagcccggagccgcattccccgtcccagcatgagtcagggttgcagtcgcgacaccagt
cgcgagagcagccgcgacaccagccccgctcggggcttcactcctctggcctcccgacgt
cactcccgttcaaccagcgctctctccacagccgacccccacagccagtcagaccgctat
ggtttgattcaccaagcaaggatctctgcatcggtcaatgccatgagggtcctaaacacc
ggcacagaggtggaggcagcagttgctgatgctctgctgttaggagactccaggaataag
aggaagccattgaggcggcggtacgagtcaccggggatgtactcggatgacgacgctaac
agcgacgcgtccagtgcctgctcagagcgctcatacggctcaaggaacggaggcattcct
cattacctgcgccagacggaggacgtggcggaggtcctaaatcactgcgccagctccaat
tggtcagagaggaaggagggcctgctgggcctgcagaatctcctcaagagccaaagaata
ctcagccgagtggagctgaagagactttgtgagatcttcaccaggatgtttgcagatcca
catagcaagagagtgttcagcatgtttctggagactctggtggacttcatcacggtgcac
agggaggacctgcaggactggctctttgtcctgctcactcagctgctcaagaagatgggg
gcagacctgctgggctcagtccaggccaaagtccagaaggccctggatgtcacaagggag
tccttcccatttgaccagcagttcaacattctgatgaggttcatcgttgatcagactcag
acacctaatctaaaggttaaggtggccattttgaagtatattgagtccctggctcggcag
atggacccgacggactttgtaaactccagcgagacacgcctggctgtatctcgcatcatc
acctggaccaccgaacccaaaagttctgatgtcaggaagacccttcaaaactgggtgagc
gaggagctagctggcaggtccagctctgcagccttactgtccgctgagggcaaccaggaa
gaaaggtgtaagcaggcggcccaggtggtgctgattgctttgtttgagctcaacacccca
gagttcaccatgctgctgggagctcttcccaaaaccttccaggacggagccaccaaactg
ctgcacaaccacctgaagaattccagcaataccagcagcagtgttgggtctccaagcaac
accatcggccggacgccgacgcgccacacccccagcagaaccagccccctcacctctcca
acaaactgttcccacggaggactgtccccaagtcggttatggggctggggtgtcgacgga
ctgtcaaagcatccccctgcccctcctcctcctccaccccactccacccctgctgccccc
tccctaagggtcctgcgcagagcatattcacccagcatgatggagtacgacacagagaac
atgaactcagaggagatctacagctcactgcgaggcgtcaccgaggccatccagagcttt
agctaccgcagccaggaggacctgaatgagccaatcagacaggagggcaagagggatgac
gctgcaggaagagagggcgtcgcgtcctctccaggctctgacgcccgcctgggcttagac
atggtggaagggggacgcaccgccttagacaacaagacctcactactcaacacgccgtca
cctcgctcgttctccgggccacggagccgcgagttcgccccctacggttacggagagacc
atctgcacgtatgacaagagtgccctgaaggaggcggtgtttgacgacgacgtggagcag
ttccgtgactgccgacgtcaggaaagtggtgaaaacaagatgacgctccccaaggttttt
gctcctgtcggtcaggaccactcagacctggtagccgacctgctcaaggaactgtccaat
cacaacgagcgttctgaggagcgtaaaggcgccctggtggatctgctgaagatcacacga
gaagacagcctggctgtgtgggatgagcactttaaaaccatcctcctcctgctgctggag
acactgggtgataaagatcacaccatccgagccctggccctgcgtgtgctgaaagaaatt
ttaaggaaccagccagcccgtttcaaaaactacgctgagctaaccatcatgaagaccctg
gaggctcacaaagactctcacaaggaggtagtgcgtgcagccgaggaggcggcgtccacc
ctggccggctccatccacccggagcagtgcatcaaggtgctgtgtcctatcgtgcagacg
gccgactaccccatcaacctggctgccatcaagatgcaaaccaaagtcattgaacgcatc
accaaggattcgttactgcagctgctgcctgacatcatcccaggactcctacagggctat
gacaacacagagagcagcgttcgcaaggccagcgtgttctgtttggtggctatctactct
gtgattggtgaggatctcaaaccccacctggcacagctcacgggcagcaagatgaagtta
ctgaacctgtacatcaagcgggcccagacgaccaacagcaatagcagcagctcctcagac
gtctcctctcacagttaa
DBGET
integrated database retrieval system
