Plectropomus leopardus (leopard coralgrouper): 121949131
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Entry
121949131 CDS
T07454
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121949131 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121949131 (mid1)
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121949131 (mid1)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121949131 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
TRIM_CC
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
121949131
NCBI-ProteinID:
XP_042350673
LinkDB
All DBs
Position
10:complement(20208299..20245292)
Genome browser
AA seq
690 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERAVPDSKAMTSPGDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHHVAALSDRFDKLKKSPGRFLSVVGRGHSHQE
AEQQALDSNLSSLIKRTSELESLMGKLIQTCQHVEVNASRQENKLLEECDLLINIIQQRR
QVIATKIKEGKTVRLRKLAQQIASCKQCIERSSSLIAQADQTLKETDHARFLQTAKSTCE
RVSMATASSQILLPEINLNDTFDTFALDFSREKKMLESLDYLTAPNPPVIREELCTASYD
TITVHWTSDDEFSVVSYELQYAIFTSQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGT
KYIFIVKAINQAGNRSSEPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKSH
SQDRFSSHSSYGVTGNVFIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWVGKNSASWVL
SRCNNSWVVRHNSKEMPIEPSPHLRRLGVLLDYDSGSLSFYDAVGSQHLHTFDIAFAQPV
CPVFNVWNRCLTVLTGLPIPDHLEGTDYNN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctggagtcggaactgacctgcccaatctgtctggagctctttgaggacccg
ctgctcttgccctgcgctcacagcctttgtttcaactgtgcccatcgcatcctggtctca
cactgcacgcccagcgagccaattcagtccatcagcgcctttcagtgtccaacctgtcgc
tatgtcatcacccttaatcagaggggcctagagggactcaaacgcaacgttacattacag
aacatcatcgaccgctatcagaaggcttctctgagtggacctaattctcctaacgagacc
cggcgcgagcgagccgtccccgacagcaaagccatgacttctcctggtgaccgggtgcag
tgccagttctgcgagcaggaccctccgcaggatgccgtgaagacctgcgtcacctgtgag
gtgtcgtactgcgacgagtgtctcaaggccacccaccccaacaagaagccgttcacgggc
caccgtctaatcgagcccttgctggactcccatctgcgagggctcatgtgtctggagcat
gaggacgagaaggtcaacatgtactgtgtgacagatgaacagttgatctgtgcattgtgt
aagctggttggccgacaccgggaccaccacgtggcagcgctcagtgaccgatttgacaaa
ctcaagaaatcgcctggccgctttctcagtgtggtggggcgtggtcattcacaccaggag
gcagagcagcaagctttggattccaacctcagcagtctaatcaagaggaccagtgagttg
gaaagtctgatgggcaaacttatccaaacctgccaacatgtggaggtgaatgcgtcgcga
caagagaacaagctgctggaggagtgtgacctgctgattaatatcatacagcagcgaaga
caagtcattgccacaaagataaaggagggaaagactgtgcggctgaggaaactagcccag
cagatagccagctgtaagcagtgcatcgaacgatcctcctccctcatcgctcaggccgac
caaactctaaaggagacggaccacgctcgcttcctccaaacggctaaaagcacctgcgag
agagtgtctatggcgacggcttcctctcagatcctgttaccagaaataaatcttaatgac
acttttgacactttcgctttggacttctcaagggagaagaagatgctagaaagcttggat
tacctcacagcaccaaatccaccagtaatccgcgaggaattatgcacagcctcatacgac
acgatcacagttcactggacgtcagatgatgaattctctgttgtatcatatgaacttcag
tacgccatcttcaccagccaatctaacgttgtcagtttgtgtaactctgctgacagctgg
atgattgtaccaaacatcaaacagaatcactacaccgtgcacggcctccagtgtggcacc
aagtacattttcatagtgaaggccataaaccaggctggaaaccgcagcagtgaaccaggg
aaactaaaaaccaacagtcagccattcaagttggacccaaagtcagctcaccggaagctg
agggtttcccatgacaacctaacagtagagagggacgagacgtcgtccaagaaaagccac
agtcaggaccgcttctccagccacagcagctacggtgtcactggaaatgtctttatcgac
agcggccgccattactgggaagctctgataggaggaagcacatggttcgcagtgggcatt
gcatacaagtcagcaccaaaacacgagtgggtcggcaaaaactctgcctcctgggtactg
tctcgatgcaataactcgtgggtagtgcgtcacaacagcaaggagatgcccatcgagcct
tcaccccacctgcgtcgtctgggagtattgttggattatgactctggatctctgtctttc
tacgacgccgtgggctctcagcacttgcacacatttgatatcgcctttgctcagccagtc
tgccctgtgttcaacgtgtggaacaggtgtttaaccgtcctcaccggactgcccatccca
gatcacttagaggggacagactacaacaactga
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