Plectropomus leopardus (leopard coralgrouper): 121949233
Help
Entry
121949233 CDS
T07454
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121949233 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121949233 (bard1)
04121 Ubiquitin system [BR:
plep04121
]
121949233 (bard1)
03036 Chromosome and associated proteins [BR:
plep03036
]
121949233 (bard1)
03400 DNA repair and recombination proteins [BR:
plep03400
]
121949233 (bard1)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
121949233 (bard1)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121949233 (bard1)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121949233 (bard1)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
121949233 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_4
Ank_5
Ank_3
BRCT_2
BRCT
Ank_KRIT1
zf-RING_5
zf-RING_10
zf-C3HC4_3
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121949233
NCBI-ProteinID:
XP_042350799
LinkDB
All DBs
Position
10:complement(14467271..14496034)
Genome browser
AA seq
795 aa
AA seq
DB search
MDNDVPVQTKDWKNTKEAVANFRRLLLCSKCSNLMTDPVCLGMCEHMLCRSCAGPRAGDG
CVVCQSPAWVKDIQINRQLSSIIQLFCGLESLLDPIKHPDKVQTQPKSPVFKHKKNFKIW
FSPRSRKVRCMVEKPSEVTVLESTSSGETAAAQPDSLTAQHQDLSVFNFTLSSQDSSSSC
PQTCKNENRKKRSTKKNAASRKVQGATRTTRKRAKQEMKKNRLEAINQQWGITKEADALK
EKEQPCAEGARRSSKRVSFLSPAVTSDEPQPVVPQGSANELSPNRSTTRESLQVGSTTVL
NDQTQPGQRMSDSVDQHDKLSETDKPEKHRNVSPPKSSSKRSRLEEKVTTLETTPKRPRA
SPGRGRKSQMSPAVLNPPSSASPRFDKRIKNSRGEQGDSPSARATVDRKSPCSPGASVGR
PTSGSPAVMKRNHKGESLLHLAAIKGDVEAVKELLDQGADPNLKDNAGWTPLHEACNLGY
LAVVEVLVSRGALLNTPGYENDSPLHDAVRNGHPAIVKLLLQLGASQNVLNLYGKRPVDY
AVSVEMQEIFQEASEGTQYANTSLSPSASLSKLSDCVRRDETVVFLASKLSQPEQLQVAK
LGELLGGSMADTFSGSVSHVVVPEGHMPTTNSTLLGLLAGCWVVRFSWVEACLQAGKWIP
ETEHEAGEGPQRSRVNRCSLLPPLFDGCFFFLLGSFKAPSRDELTKLLRKGGGQFLSRQP
KPDSDVTQTLSAAAYHAQPGSDQALCTQYIIYDPQEPHRPAVVRRGKVWSAPSTWLIDCI
TAFRLLPVPDPQTSI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggataatgatgtccccgtgcagacaaaggactggaagaatacaaaggaggcggtggcg
aactttcgacgactgctgctttgctccaaatgctcaaatttaatgacggatcctgtgtgt
ctaggaatgtgcgagcatatgctgtgcaggtcctgtgctggcccccgggcaggagatggc
tgcgtggtgtgccagagtcctgcgtgggtgaaggacatccaaatcaacaggcagctcagc
agcatcatacagctcttctgtggtttggagtctctgcttgatcccataaaacatccagat
aaggttcaaacacaacctaagagccccgtctttaaacacaaaaagaacttcaagatctgg
ttcagcccccgtagccgcaaggtgcgctgcatggtggagaagccttcagaggtcactgta
ctggagagcacgtcttctggagaaacagctgcggcacagccagactccctcactgctcaa
caccaggacctgtcagttttcaatttcactttgtcctcccaagattctagctcttcttgc
cctcaaacatgcaagaatgaaaacaggaagaagaggtcaactaagaaaaatgccgccagc
aggaaggtgcaaggagccactaggaccacacgaaaacgggccaagcaggagatgaagaag
aacaggctggaggctataaaccagcaatgggggatcaccaaggaggcagatgccttgaag
gaaaaggagcagccctgtgctgaaggggcgaggaggtccagtaaaagagtttccttccta
agccccgctgtcacgtctgacgagcctcagccagtagtgccacaggggagtgctaatgaa
ctcagccctaacagaagcaccacgagggagagtctccaagtaggcagcaccactgtactg
aatgaccaaacccagcctggtcagagaatgtcagacagtgtcgaccagcatgacaaactg
agtgaaactgacaagcctgaaaaacaccgaaatgtgtctcccccaaagtcttcctccaag
agatccagattggaggagaaggtcaccaccttggagaccacaccaaaaaggcccagggct
tccccaggcagggggaggaaatcacagatgtctcctgccgttctcaatcccccatcttct
gctagccccaggtttgataagagaatcaaaaactccagaggagagcaaggagacagcccc
tctgcccgagcaactgttgatagaaaatctccctgttctcctggtgcatctgttggacgt
cccacttcaggaagccctgcggtgatgaagaggaaccacaagggagagagcctgctgcat
ctagctgctataaagggggatgtagaggctgtcaaagaactgctggaccagggggctgac
ccaaacctgaaggataatgctgggtggacacctctgcatgaagcatgtaacctgggttac
ctggcggttgtggaggtgttggtctctaggggagccctgttgaatacgcctggctatgaa
aatgactcaccactccacgatgctgtgaggaacggccacccagccattgttaaactgctg
ctacagcttggagcctcgcagaacgtacttaatctgtatggaaagcggcctgtagattac
gcagtgagtgtggagatgcaggagattttccaggaagcctcagaaggaacccaatatgct
aacacatctctgagcccgtcagccagtctctctaagttgagcgactgtgtgaggagggat
gaaacggtggtgtttctggccagcaagctgtcacagccagagcagcttcaagttgccaaa
ctgggagagctactgggagggagtatggctgacaccttctctggctcagtgagccatgtc
gtggtgccagaaggacacatgcccaccaccaactccaccctcctgggtcttcttgctggc
tgctgggttgtcagattcagctgggtggaggcatgtctgcaggcaggcaagtggataccc
gaaactgaacacgaagcgggagaaggcccccagcgcagtcgcgtcaacagatgcagcttg
ctcccaccgctcttcgatggctgtttcttcttcctgcttggctccttcaaggcgccttcc
agagacgagctcaccaagctgctccggaaaggagggggtcaatttctgagcaggcagcct
aagccggacagcgatgtaacacaaaccttgagtgccgctgcctaccacgcacagccaggc
tccgaccaggccctctgcacccagtacatcatctatgaccctcaggaacctcacaggccg
gcagtggtgaggcgaggtaaggtgtggtcagcaccctccacctggctcattgactgtatc
acagcattccgcctcctccccgtgccggatcctcaaacatcgatctaa
DBGET
integrated database retrieval system
