Plectropomus leopardus (leopard coralgrouper): 121949299
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Entry
121949299 CDS
T07454
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121949299 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121949299 (lmo7a)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121949299 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121949299
NCBI-ProteinID:
XP_042350883
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All DBs
Position
10:24964291..25041306
Genome browser
AA seq
1400 aa
AA seq
DB search
MEWREQSAVSCDEAYSEAQRWIEAVTKKKFGSDDFRSALENGVLLCELINKIKPGTIRRV
NKLPTPIAGLDNLNVFLKACGKLGLKEAQLFHPGDLQDLSTRVTVKHQETNRRLKNVLIT
IYWLGRRAQCDRVYDGPYLNFKAFEGLLGTALYKALQESSSQKGSVRDSGFGDSWYSERE
EFFQLRGGGGGGHRRDDSLDSLDSLGSRPQSISSDTTLKGGSSEGCCSDTEADSVYRMAE
HKDSLSYRRSVTITPKTSTPFNQFLPTKDKPSGYVPAPLRKKRAERNEESRRSWANPTYG
EEEGTLTRQHQTQESIDGSKSTNDIQVDPAIIRQVRYEELQKYREQMRDSEDKWQDDLSK
WKTRRRSVNSDIVKKKEEREKIEQITTSSSNRRSKTFREMQEGRENRNSIGSGLGSLSYL
DDEDVFDKPVISPRTRTLPARSYTIDTPYFSSEPSEPPIKEDEPPAASPATGRAASPPTS
RDTVDSPAGSDATTTITPRSRRFVPSSQPPAPLQPSPVSKPTSTVKPEETTTTVSSFSSL
EKVPKPRRPLSGTQTEVGAPSSGSLYKQQPQPSSMEPKPPGVSRVSASLPRSYQRSDSAR
LTSVVTPRPFGTQSSRLSSLPRAFTMDDAQKRVNGGTDVSKKSSVPSRYHQFMTSEDENQ
SSSAQSSEDEEEEEEKEDKTTAKSITSAKSVSPVPPQVKSEAPLSPAPAKETSQENYCER
RISLNQKPNSSRDFGFQAAWDSTGARVTSIQPGSPAEMCQLQTGDEVLTVNGHQVAEMSY
TDWKSHMEEALQEGSLVMDIRHHGKNNWDRDQPSLPFKSHKTINLTSMDHPILLGSTDTN
AVSSSLDFTSRASVEKMPSREAPAHPVVDVASNGVNGGFREQPVTMRSKESEPISLKNLK
RRSEFFEQGGSESAMPDIPVPSITPSSSRWSWDPEEERRRQEKWQKEQERLLQEKYKRDQ
EKLQEEWLKAQQEVAKSEAQQESGSLEVNSHSISPRSPLSPVNQPSSAPWEEEERKRKEE
QERQRQAEEQERQRQAEERERQRQAEERRKREEEERELQRLQEERQKRERQAEEERKRRE
EEELRWQRRREEEREEERRRQEAAEQQRRERERALEQQQWAAGSHGFANVQPSLSFADRA
KSKSTSQLDEEEKPQRKVAGSGPGERKGQLSLSQAELERQQILNEMKKKTSLLTDGSWIR
QRSSNTVKETEDVPPMRRGESLDNLDASYNSWRSSWTPRSNSHIPNYSRPHSALSGSSSF
YGGGRSGSSTLPSSYSMSSLRGGAGTPSSPWSRQSPSPSPSSPSPATSPEPTSEAGAPQQ
RSRSVSGKKICTFCDAPLGKGAAMIIESLGLCYHLGCFKCIDCKSDLGGSEAGAEVRIRN
KQLYCNSCYVRFKAGQPTSM
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtgagcagtccgctgtcagctgtgacgaagcctactcggaggcgcagaga
tggattgaggcagtaaccaagaaaaaatttgggagcgacgacttccgatcagcgctggag
aatggcgttctgttgtgtgagctgatcaacaagatcaagcctggtaccatcaggagggtt
aacaagctgcccacacctattgctggactggacaacctaaacgtcttcctcaaggcctgc
gggaagctcggactaaaggaagcacagctgtttcacccgggagatctccaggacttatcc
accagagttacagtcaagcatcaagagaccaacaggaggctgaaaaatgttttgatcacc
atttactggctggggagaagagctcagtgtgaccgcgtctatgatggaccttacctgaat
ttcaaggcatttgagggattattgggcacagcactatacaaggctctgcaggaatcgtcc
agtcagaaaggcagcgtccgagacagcggttttggagacagctggtactcggagcgagag
gagttcttccaactgagaggaggaggaggaggtggacacaggagagacgactctttggac
agcttggactctttgggctcccgaccacagagcatctcgtctgataccactctcaaaggc
ggcagcagtgagggttgttgcagtgacactgaggcggactctgtctacaggatggctgaa
cacaaggacagtctcagttaccgccggtcagtaaccatcacacccaagaccagcaccccg
tttaaccagttcctgcccactaaagacaaaccctcaggctacgtgcctgctccactgagg
aagaaacgggccgaacgcaatgaggagagccggcgtagctgggccaaccccacgtacgga
gaggaggagggcacgctcaccagacagcaccaaacgcaagagagtatcgacgggagtaaa
tcgactaacgatatccaggtcgaccccgccatcatccggcaggttcgctatgaagagctg
cagaagtatcgtgagcagatgagggacagtgaggataagtggcaggatgacctgagtaaa
tggaagacccggcgcaggagtgtcaactctgacatagtgaagaaaaaagaggagagggag
aagatagagcagatcaccaccagcagcagcaacagaaggtccaagaccttcagggagatg
caagaggggagagaaaatagaaacagcattggcagcggtctcggatccttatcctacctg
gacgacgaagacgtgtttgataaacccgtcatttccccacgtacccgaacccttcctgcc
aggagctacaccattgacactccatacttttcatctgaaccctctgagcctcccattaaa
gaggacgaaccccccgctgcctccccagcaactggcagggcagcttcccctcccacctca
cgggacaccgtggacagtcctgcaggcagcgacgccacgactaccatcactccccgcagc
cgccgctttgtccccagctcccagcctccagcacctttacagccaagtccagtctcaaaa
cccaccagcactgtcaagccagaggagaccacaaccaccgtgtcctcctttagctcccta
gaaaaggtgcccaagccaaggcgcccattgtcgggcacacagactgaggtgggggccccc
tcctctggttctctgtacaaacaacaaccacagcccagctcaatggaacccaagcctccc
ggggtgtctcgggtttctgcctccctccctaggagctaccagagatcggatagcgcacgt
ctaacctcagttgtcacgccaaggcccttcgggacccagtcgtcccgcctcagctcactc
ccccgagcctttacaatggatgatgctcagaagcgagtcaatggaggcaccgatgtttcc
aagaagtcatcagtgccgagccgctatcaccagttcatgacctctgaggacgagaatcag
tccagctcggcccagagcagtgaggatgaggaggaggaagaggagaaagaagacaagacc
acagcgaagagcatcacctcagctaagagcgtctcacctgtccctccgcaggtcaagagt
gaagcaccgctcagtcctgctccagccaaagaaaccagccaggagaactactgtgagagg
cggatcagcctgaaccagaaacccaacagcagcagagactttggtttccaggcagcctgg
gactcaacaggagctcgtgtcacgtccatccagccaggcagcccggcagagatgtgccag
cttcagaccggagacgaggtgctgacggtgaacggacaccaggtggcagaaatgagctac
acagattggaagtctcacatggaggaggctctgcaggagggcagtctggtcatggatata
cgccatcatggcaagaacaactgggacagagatcaaccttccctgccatttaaaagccat
aagaccatcaatctgaccagtatggatcatccgatacttctaggttccaccgacacaaac
gctgtcagctccagtctggatttcacctcacgggcttccgtggaaaagatgccgtccaga
gaggcccctgcccacccagttgttgatgtggcttcaaacggagttaatggaggtttccgg
gagcagccggtgaccatgaggagcaaagagtcagaacccatatctttgaaaaacttaaaa
cggaggtcagagttttttgaacaaggaggatcggagtctgcaatgccagatattcctgtt
ccttcaatcactccgtcttccagccgctggtcctgggacccagaggaggagcgcagaaga
caagagaaatggcagaaggagcaggagcgcctcctacaggagaaatataagcgtgaccag
gagaagttgcaggaggaatggctaaaagctcagcaggaggttgccaagagtgaagcccaa
caagagtctgggagcctggaagtgaacagccacagcatcagcccacgctcccccctctct
cctgtgaaccagccctcctctgctccgtgggaagaggaagagagaaagaggaaggaggag
caggagcgccaaaggcaggcggaggagcaggagcgccaaaggcaggcggaggagcgggag
cgccaaaggcaggcggaggagaggaggaagagggaagaagaggagagggagctgcaacgt
ctacaggaggaaaggcaaaagagagagaggcaggcagaggaggagaggaagaggagggag
gaggaagagctgagatggcagaggaggagagaggaggagagggaggaggagaggaggagg
caggaggctgcagagcagcagcgcagagagcgggagagagccttggagcagcagcagtgg
gctgctggctcccatggctttgcaaatgtccagccgtcattgtcctttgcagacagggcg
aaatctaaatcaacttcccagcttgatgaagaggaaaaacctcagagaaaagtggcgggc
agcggaccgggtgagaggaagggtcagctgtccttgtcgcaggcagagctggagcggcag
cagatcctgaatgagatgaagaagaagacgtcgctgctgacggacggaagctggatccgc
cagcgctcctccaacactgtcaaggagacggaggatgtgccacccatgcgcagaggcgag
tctcttgacaacttggacgcctcctacaactcgtggcgttcatcttggacacccagaagc
aactctcacatcccaaactactctcggcctcactctgccctctctggcagctcttctttt
tacggtggcgggcggtccggctcctccactctgccttcctcctactccatgagctccctc
cgaggtggggcaggaaccccctcgtccccttggtcccggcagtcgccttccccctcaccc
tcctccccgtcacccgccacctctccagagccgacgtctgaggcaggcgcccctcagcag
cggagcaggtcagtgagtggcaagaaaatctgtacgttctgtgacgccccgctgggaaag
ggagcagccatgatcatcgagtccctcgggctctgttatcatttgggctgttttaagtgt
atcgactgtaagtctgacctcggaggatcggaagccggggctgaagtcagaatacgaaac
aaacagctctactgtaactcctgctacgtgcgatttaaagctggccagccaacctctatg
tga
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