Plectropomus leopardus (leopard coralgrouper): 121949383
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Entry
121949383 CDS
T07454
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121949383 (sox1a)
Transcription factors [BR:
plep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121949383 (sox1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
KOKOPELLI
Motif
Other DBs
NCBI-GeneID:
121949383
NCBI-ProteinID:
XP_042350989
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All DBs
Position
10:23509030..23510326
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AA seq
344 aa
AA seq
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MYSMMMETDLHSPGPQTNTNTGQTGPNSGSKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGGGVGLGVGMSSSGVGQRLESPGGHGGSASSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQPMHRYDMTALQYSPISNSQ
SYMNASPSGYGGITYTQHQGSGVSSSAAMGTLGSLVKSEPSVSPPVSSTHSRGPCPGDLR
EMISMYLPTGEPGDPSMQSRLHALPQHYQSATAGVNGTVPLTHI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaactgaccttcattccccgggtccccaaacgaacacgaac
acggggcaaacggggccaaacagcggctccaaagcgaatcaggagcgcgtgaagagaccg
atgaacgcgtttatggtgtggtcccgcgggcagcggagaaagatggcacaggagaacccc
aaaatgcacaactctgagatcagcaaacggctgggcgccgagtggaaggtgatgtccgag
gctgagaagcgccctttcattgacgaggcgaaacggttgcgcgccatgcacatgaaggag
catccggattacaagtaccggccaagacggaagaccaagacgctgctgaaaaaggacaaa
tattccctcgccggtggactgctttctgggcccagtgggggcggtggagttggtttaggg
gtcgggatgagttcatccggggtcggtcagaggttagagagccccgggggtcacggaggc
tccgccagctccggctacgcgcacatgaacggctgggcaaacggtgcgtactcggggcag
gtggctgcagccgcggcggccgcagcgatgatgcaggaggcgcagctcgcttacagccag
cacccgggcagcggagcgcaccaccaccaccactcacaccaccatcactcacacaacccg
cagcccatgcaccgctacgacatgacagccctgcagtacagccccatctcgaactctcag
agctacatgaacgcctctccatccggctacggcgggatcacctacacgcagcaccagggc
tccggcgtctcctcctcggccgccatggggacgttagggtcgctggtgaagtcggagccg
agtgtaagccctcccgtcagcagcacacactcacggggtccttgccccggagacttgaga
gagatgataagcatgtatttaccgaccggagagccgggggacccgtcaatgcaaagtaga
ctccatgccttgccgcagcattaccagagcgccacggctggagtgaacgggacggtccct
ctaacacacatttag
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