Plectropomus leopardus (leopard coralgrouper): 121949443
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Entry
121949443 CDS
T07454
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
121949443
NCBI-ProteinID:
XP_042351067
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Position
10:24368355..24404335
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AA seq
773 aa
AA seq
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MPASCLYLLMQGLIQETISTTKPRSVKALAMPPLPVPHFLTLLQLAVLTYVSAGAYYGHK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NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcatcatgtctgtacctgctgatgcagggattaatacaggaaacaatcagcaca
accaaaccccgctctgtgaaggccttggccatgcctcccctccctgtcccccacttcctg
acgctgctacagcttgcagtactcacttatgtgagtgctggggcgtactacggacacaag
caacaccctcagcagtaccagcccatgcagcacctccagcacatgggtgttggcaaagaa
ggctttcctcaacagcagtaccttggcaaagaagtgccctacatgcagtatccccactac
aggaaggagccaccccagatgcccatgcacaagggcaaagaaaatgctcgtaaaggaggc
ggttataaaggtggccaagacaaaggtcagacaatccctggtggtgctgagggaattccc
caaggagagcaaggcccagctgggccacctggaccagagggacctgcaggacctcctgga
cctccagggaatggactgcctggacctgcaggacgacctggacctcctggtccaccagga
gggcccggagtaggaaaaccaggtttgccaggactgccaggcaagccaggagcaaatggg
gaggctggaccacaaggagaaatgggccctaggggtgaagaagggccagctgggcagcca
ggacctcagggtcccccaggaccacctgggctaccaggaataggtagaccaggagtacag
ggattacccgggcaaccagggaccaaaggagagccaggtcacaaaggtctgccaggtcta
ccaggattaccaggacccaaaggagacaaaggaatgggcctgccaggccaacctggtcac
aaagggctcccagggcccccaggacctgctggcccaagagggctgcctggttttggaaaa
cctgggttgaatggagcaccagggccacaaggaccaccaggtgagaaaggacatcctgga
gagccaggaccagctgggacacctggtgaaggaggaaagcctggcccaccaggtctacct
ggtcaaggaaagccaggtcaaaatggcctgccaggacaaccaggcatgccaggtggaaaa
ggtcatccaggaccaccaggtttgccaggaaagccaggactgcctggatttggtaaacca
gggctcccaggaccaaagggtgataaaggtatgggtgggccacctggacttccaggacca
aaaggagataagggccacggaggactacctggaatgcttggaccccctggaccaaatggc
cctccaggtcctccaggccctatgggaaccccaggaggtgtaggtgcacctggtccaaaa
ggagactgtggagaaggaggaccgcaagggcttgatggagcccagggtgaaccaggtgcc
cctgggttacctgggaaggatggtctgcctggagatcgtggagagtcaggaccgagaggt
ccacccggaccaagtggtgccaaaggagacattgggcacaaaggtctacctggcaaccct
ggtcctcaaggacttcctgggcccaaaggacaaggtggattacctggtgaaatgggacct
caaggtcctaaaggaatccctggaatggatggcacagcggggccaattgggcctcctggt
cttccagggccaaaaggagaaagaggtctaaccggtccaccaggcactgcaggtgagggc
aatccaggtcttcccggtcccgcaggacccccaggaaaagagggctcatctggaccccct
ggacaaccaggtctgcctggccctcctggcccaccaggcccacctggagcatctggtctg
tctcccgacatggcaggagtgctctctcagatgggccccgcactcgatggtgttaaggct
gggggttatggtaagaagggacaatatgcaggcaatggggcagaagtgatgggtgccagt
gggttggaaatgccagcattcacagcagtagtaacaacaccctttccacctgtgggcact
ccggtcatctttgacaagctcctgtacaatggtcgccaaaattacaaccctgagacagga
atcttcacctgtgacatgcctggcatttattactttgcctaccatgttcattgcaaagga
gctaacgtgtgggtggctttgatgaggaacaatgagccagtaatgtatacatatgatgaa
tacaaaaagggtttcctagatcaagcatcggggagtgcagtactacctctacaacccggg
gacactgtgtatattcagctgccctcagatcaggcctcaggactttacgcagggcagtat
gtgcactcctccttctctgggtatttgttatatccgatgtaa
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