Plectropomus leopardus (leopard coralgrouper): 121949446
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Entry
121949446 CDS
T07454
Symbol
edar
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121949446 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
plep04050
]
121949446 (edar)
Cytokine receptors [BR:
plep04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121949446 (edar)
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Paralog
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Motif
Pfam:
Death_EDAR
TNFR_c6
DUF2852
Motif
Other DBs
NCBI-GeneID:
121949446
NCBI-ProteinID:
XP_042351070
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Position
10:complement(12970772..12996244)
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AA seq
522 aa
AA seq
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MSERRGQKKSIFLSSLLVCCMFASAEYSNCGEYEFFNQTSNSCQACPQCQPGQEPRMTCG
YGVKDEDFACVPCPQGKYSKGKYEICRRHKDCDALYKATVRVAGTPDSDAECGPCLPGYY
MLETRPRNLYGMVCHSCQNAPRNTKECQMSTIGPREKPIIXPGSTTVFPHPHKDSTGQGH
LATALIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTSKQEDKKDVP
DNVVIYSEKDEFDKLKAAPQKTVKSENDASSENEQLLSRSMDSDEEAGSDKQGSAETNNP
NPCLVNLGNKPDLCLLSLGLLERERACNASPTTAAGQANNFQSPNHIANVNHFANSNHIS
SVNAVNNNNKTPGILQSRRKKILDLYARACNVTEGLSPTELPFDCLEKTSRMLSSSYSSE
AAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESL
CSDVLGSGEMAAAAGRQGNSSFHSQLVCSSPCPSPSQRCASV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaggagaggtcagaagaagtccatctttctgtcctcattattggtgtgctgt
atgtttgctagtgcagagtattccaattgcggagaatacgaattcttcaatcaaaccagt
aacagttgccaagcctgccctcagtgccagccaggacaagagccgcgtatgacctgtggc
tatggtgtgaaggatgaggactttgcctgtgtgccgtgcccacaagggaaatattccaaa
gggaagtacgagatctgcagacggcataaagactgtgacgccctctacaaagccactgtt
cgtgtggcaggcactccggacagcgacgctgagtgtggaccgtgtttaccagggtattac
atgctggaaaccagacccaggaacctctatgggatggtctgccactcctgccagaacgca
ccacgaaacaccaaagaatgtcaaatgtcaaccatcgggccaagagaaaaacctataatt
ngacccggtagcaccactgtgttccctcatccacataaagattccactggacaaggtcac
ctagcaacggctcttattatcgccatgtcaaccattttcatcatggccatcgccatcgtc
ctcatcatcatgttttatatcctgaaggccaaaccgagtggccaggcctgttgttccgga
caagttgtgaaggcagtggaagctcagaccagcaaacaggaagacaagaaagatgtccct
gacaatgtggtgatctactcagagaaagacgagtttgacaaactaaaagctgctcctcag
aagacggtaaaaagtgaaaatgatgcgtcatcagagaatgagcagctgttaagccgtagc
atggacagcgatgaggaggctgggtctgataagcaaggatcagccgaaaccaacaacccc
aacccgtgccttgtcaacctggggaacaagcctgacctctgcctgctctcactgggcctc
ttagagcgcgaacgtgcctgcaacgcatcccccaccactgcagccggacaggccaacaac
ttccagagtcccaaccacatcgccaatgttaaccacttcgccaactctaaccacatcagc
agtgtaaatgcagtcaacaacaacaataagaccccggggattctacaaagtcgaaggaaa
aagatcctggatctgtatgctagagcctgcaatgtaacagagggcctgagccccacagag
cttcccttcgactgtctggagaagaccagccgcatgctgagctcctcctacagcagcgag
gcggccgtggtgaagacgtggaggcacctggctgagagctttgggctaaagcgcgacgag
atcggtggcatgagtgatggcctgcagctctttgagagagtgagcacggcgggctacagc
atccctgacctcctgacaaggctggtacaaatcgagaggctggacgccgttgagtcgctc
tgctcggatgtgctgggcagtggtgagatggcggcggctgccggtcgacaaggcaacagc
agttttcacagccaattggtctgttcatccccatgcccatctccatctcagcgctgtgcc
agcgtctaa
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