Plectropomus leopardus (leopard coralgrouper): 121949491
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Entry
121949491 CDS
T07454
Symbol
rab5b
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04137
Mitophagy - animal
plep04144
Endocytosis
plep04145
Phagosome
plep04148
Efferocytosis
plep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121949491 (rab5b)
04145 Phagosome
121949491 (rab5b)
04137 Mitophagy - animal
121949491 (rab5b)
04148 Efferocytosis
121949491 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121949491 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121949491 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121949491 (rab5b)
04031 GTP-binding proteins [BR:
plep04031
]
121949491 (rab5b)
Membrane trafficking [BR:
plep04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
121949491 (rab5b)
Endosome - Lysosome transport
121949491 (rab5b)
Exosome [BR:
plep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121949491 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
121949491 (rab5b)
Exosomal proteins of colorectal cancer cells
121949491 (rab5b)
Exosomal proteins of melanoma cells
121949491 (rab5b)
GTP-binding proteins [BR:
plep04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121949491 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
121949491
NCBI-ProteinID:
XP_042351122
LinkDB
All DBs
Position
10:32448716..32455363
Genome browser
AA seq
217 aa
AA seq
DB search
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGRNKADLAERRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIA
KKMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagagggagtggaggccgctccaacggcacactaccacagaccaagatctgc
cagttcaaactggtgctgctgggcgacatggctgtgggcaagtccagcctggtgctgcgt
ttcgtcaagggacagttcgatgagttccaggagacaactataggagctgcgttcctggct
cagtcggtgtgtttagacgacaccacggtgaagtttgagatctgggacaccgcgggtcag
gagcgataccacagcctggcgcccatgtactaccgcggcgctcaggccgccatcgttgtc
tttgacatcaccaagccggagacttttgagcgagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacatcgttattgctctggctggccggaacaaggccgacctggca
gagaggagactagtagagtacgaggaagcgcagacgtacgctgaagacactggcctgctc
tttatggagacctccgccaagacggccatgaacgtcaatgagctcttcctggccattgca
aaaaagatgccaaaaacagacacccaaaacccgacacatgcagcgcgacatcggggagtc
aacctccaggacccagacgcccactccactcgagcctgctgcggcgggaactag
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