Plectropomus leopardus (leopard coralgrouper): 121949513
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Entry
121949513 CDS
T07454
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
121949513 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plep03400
]
121949513 (xrcc5)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
121949513 (xrcc5)
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
Ku_PK_bind
VWA_2
DUF6005
VWA
Motif
Other DBs
NCBI-GeneID:
121949513
NCBI-ProteinID:
XP_042351153
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All DBs
Position
10:15318725..15332690
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AA seq
692 aa
AA seq
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MAGGKSALVLCMDVGFSMSNSAPGEEPPFELAKKVIQKFVQRQVFSESKDELALVLFGTD
STKNPLDQDGQYQNITVHRNLMIPDFELLEEIENQIHPESQQADWLDALVVCMDLLQTGT
KGKKCDRLNIALLTDLNTQASSEQIDVIIENLKQAGITLQFFLPFPAEEDEEGGGDANGR
GPGHPGMGKGLSREQKSGLDMVKHIMLSLDEEDGLDEIYTFRNAVEQLCMFKRIERRPMA
WPCQLTIGSCLPIRIVGYKAVTEEKLKKSWITVDAQTNQRDDVKRETVYCLDDDNETEVQ
RDDTIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKENMIRRHQFMGTQVIKIFA
AKDDEHAAVALSALIRALDELNMVAIVRYAYDRRSNPQVGAAFPCIKPGYECLMYIQLPF
MEDLRQFTFPSLENNKKFTPTDTQLSAVDSLIDSMMLVEKDDNEEQKDMFKVHHIPNPAF
QRLFQCLHHRAVSPASPLPPIEPWLKAALERPEVITERCQAPLEEIKKKFPLTEVEKKKK
LKTSAQIFGKDSEEPDAKKAKGDEEEEEYNLADIAEGSVTSVGSVDPARDFRTLIKKKSL
PFGEVCQQLTHRIEQLLSNKNTHYYMKSITCIQAFREQSVKLGDASLYNSYLQSLKRSIS
SRGLEVFWDLLVQGMISLFTLGCRTSLKSFLP
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtggcaaatcagcacttgtgttgtgcatggacgttgggttctccatgtccaac
tctgccccgggtgaagaacctccctttgaactggccaaaaaggttatccagaagtttgtc
cagcgccaggttttttcagagtccaaggatgagctggctttagttctgtttggcacagac
tccaccaagaaccctctggaccaggatggccagtaccagaacatcaccgtacatcgtaac
ctcatgatccctgattttgaacttctggaggaaatagagaatcagatccatccggagagt
cagcaggctgattggctggatgctcttgtcgtgtgcatggatctccttcagacgggaaca
aaggggaagaagtgcgatcgtctcaacattgccctcctgactgacctcaacactcaggcc
agctcagagcagattgacgttattattgaaaacctgaaacaagctggcatcaccctgcaa
ttttttttgcctttccctgccgaggaagatgaagagggtggaggagatgcgaatggaagg
ggtcccggtcacccaggtatgggcaaaggtctgtctagggagcagaagagcggcctggac
atggtgaaacacatcatgctgagcctggatgaggaggacggcctggatgaaatatatacc
ttcaggaatgcagttgagcagctgtgcatgtttaagcgaatcgagaggagacccatggcc
tggccctgtcagctgaccatcggcagctgtctgcccatccgtattgttggatacaaagca
gtgacagaagagaaactgaagaaatcgtggatcacagttgacgctcaaaccaaccagaga
gatgatgtgaagagagagactgtctactgtctggatgatgacaatgagacagaggtgcag
agggatgataccatccaaggttttcgttatggaagtgatattgttcctttctccaaagtg
gatcaagaccagatgaaatacaagcacgacggcaagtgctttgctgtgctcggcttcacc
aaagagaacatgatacgccgccatcagttcatggggactcaagtcatcaagatttttgct
gccaaggatgatgagcatgcagcagtggccctgtccgctctaatcagagcgctagatgaa
ctcaacatggtggccattgtacgttacgcctatgaccggcgcagcaaccctcaagtggga
gcagccttcccgtgcatcaagccgggttatgagtgtctgatgtatatccagctgcccttc
atggaagacctcagacagtttacatttccttctcttgaaaacaacaaaaagttcactccg
acagacacccagctctctgctgtggactctcttattgactccatgatgttggtcgagaag
gacgataatgaagaacaaaaggacatgttcaaggtgcaccacattcccaacccagccttc
cagagactcttccagtgtctgcaccaccgggcagtgagccctgccagccctcttcccccc
atagagccgtggctgaaggctgctcttgagcgccctgaggtcatcactgaacgttgccag
gctccacttgaggaaataaagaagaagtttcctctgacagaggtggagaagaaaaagaag
ctgaagactagtgctcagatttttggcaaagactcagaggagccagatgccaagaaggca
aaaggagacgaagaggaggaggagtataacctggctgacattgccgaaggctctgttaca
tcggtgggaagcgtggatccagccagagacttccgcactctgatcaagaaaaaaagtctt
cccttcggagaggtctgtcagcaactgactcacaggatagagcagttgcttagcaacaag
aacacacactactacatgaaaagcatcacctgtatccaggcttttagagagcagtccgtc
aagctgggggatgcaagtctgtacaatagttacctccagtccctgaaaagaagcatctca
agcagagggctggaagtcttctgggacctgcttgttcaaggtatgataagcctctttaca
ctaggctgcaggacttctctcaaatcattcctcccttga
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