Plectropomus leopardus (leopard coralgrouper): 121949585
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Entry
121949585 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121949585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plep04515
]
121949585
Cell adhesion molecules [BR:
plep04515
]
Cadherins
Major cadherins
121949585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
121949585
NCBI-ProteinID:
XP_042351254
LinkDB
All DBs
Position
2:complement(17365158..17608391)
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AA seq
991 aa
AA seq
DB search
MGTGFLRTERXAPLSQRHFCARQVGTVVHTAPEXEDTGYRELLRCICRRSPFPFVSPTRD
FAKMNVGCVILACTLLAGASSGSKAGQPLRTPCRPGFSQNFYTVIVSRDILHGQSILKDT
TLSSERVKFEDCQRSREVGFVSSDPNFSVRPDGSVYAEQELANLSEPVQFMVTARGLHDP
HIWETTVKLALAGHPHPLALTKGGIEEMLSRVWDSQPRVIKFPRKHQRSSSANGLRRQKR
DWVIPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNM
FVTQPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEG
SKPGSSVMQVTATDSDDSTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDR
EKVSQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVPENKVNVV
VTNLTVVDRDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFEMNRAFM
LTVVVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKMIRFEEGVPAGTTLTVF
AAQDPDHFIHQIVRYSKLSDPANWLKINRTNGQITTMALLDRESMYVKNNVYEATFLAFD
NGKSGAPQASGTGTLQIYLIDVNDNAPVLIPREAQVCERARPNSRINITASDADADPNVG
PFVFELPSFPASVRRNWTISRLSGDYAQLRLRIPYLEASVYEIPIIVSDSGNPPLSNRSV
IRVKVCPCDDNGDCSATGAVAAAGLGTGAIIAILICIIILLSMVLLFVVWMKRREKERQA
KPLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIINKPAGVRRVDERPVI
AESQYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNS
TSSGDQDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggcttcctccggacggagcgcnnagcacctctgtctcagcggcacttttgc
gccagacaagtagggacggtcgttcacacagcacccgagnaagaagacacagggtaccgg
gaattactgaggtgtatttgccgaagatctcctttcccatttgtatccccaacacgcgat
tttgcaaagatgaacgttggctgcgtcatcctggcgtgcaccttacttgcgggcgcatcc
tcggggagtaaggcaggccagcccctcagaaccccttgcagaccaggcttctcccagaac
ttctacacagtgatcgtctcgagagacatactgcacggccagagcattctcaaagatacc
accctgtccagtgaacgtgtgaagtttgaggattgccagcgcagcagagaggtgggcttt
gtcagtagcgaccccaacttcagcgtgaggcccgatgggtcggtgtacgccgagcaggag
ctggccaacctgtcagagcccgtccagttcatggtgactgcccgggggctccatgacccg
cacatctgggagaccactgttaagcttgccctggccggacatcctcatccactggccctg
acaaagggtggcattgaagaaatgctgtcaagagtgtgggactcccaacccagagttatc
aagttccccaggaaacaccagaggagctcctcggccaatgggctgaggcgacagaagaga
gactgggtcatcccgcctatcaacgtgccggaaaactcccgaggacccttccctcacatg
cttgtcagaatccgctcagatcaggacaaggacgttggcatccgctacagcatcacagga
gcaggagctgatcagcccccgagtgggatctacaacatagaccccatcagcggcaacatg
tttgtcacccaacccctggacagagaggagagagcctcgttccatctgcgagcccatgca
gtggacatgaatggtaaccaggtagagaacccgatcgatctgtacatctacgtgattgac
atgaacgacaacagacccgagtttcagaaccaggtgtacaacggctccgtggctgaagga
tccaaaccaggctcgtccgtgatgcaggtgacagccaccgactcggatgactccaccaca
gctaacggcatggtgcgctaccgcattctctcgcagacgccccacagcccaatccccaac
atgttcaccatcaacagcgagactggagacatagtgacggtggcagccggcctggacaga
gagaaagtgtcccagtacaccatcattgtccaggctactgacatggagggcaacttaaac
tttggcttgtccaacacagccacagccctcatcagcattactgacatcaatgacaatcct
ccagagctgacagtccgaacgttttcaggggaggtgccagagaacaaggtgaatgtggtg
gtgaccaacctgacagtggtggacagggatcagccccacagtcccaactggaacgccgtc
taccgcatcgtcagcggagacccttctggacacttcaccatccgcaccaaccccatcacc
aatgagggcatgctgacagtggtcaagccggtggattttgagatgaatcgtgccttcatg
cttaccgtcgtggtttccaaccaggcccacctggccagcggcatccagtcctcgcttcag
tccacagcgggagtcaccatctcggttcaggatgttaacgagccgcccgttttccctgtc
aaccccaagatgatccgcttcgaggagggtgtgccagcagggactactctcaccgtgttt
gccgctcaggaccctgaccacttcatccaccagattgtcaggtactccaagctgtcagac
ccagctaactggctgaagatcaacaggaccaatggtcagatcaccaccatggccctactg
gaccgagagtccatgtacgtcaaaaacaacgtgtacgaggccacattcctagcattcgac
aatggtaagtccggcgcccctcaagccagtgggacaggaaccctccagatctacctgatc
gatgtgaacgacaatgcgccggtgctgattccccgggaggcccaggtctgcgagcgtgct
cgccccaactccaggatcaacatcactgcctcagatgcagacgctgacccaaacgtaggg
ccctttgtctttgagctgccttcttttcccgccagcgttcgccgcaactggacaatctcc
agactcagtggtgactatgctcagctgaggttaaggattccttacctggaggcgagcgtg
tacgagatccccatcatcgtgtctgattctgggaaccctcctctgtccaaccgctctgtg
attcgagtcaaagtttgtccctgtgatgataacggggactgcagtgccacaggcgctgtg
gcagccgccggcctcggcaccggggctatcatcgctatactcatctgcatcatcatactg
ctcagcatggttctgctgtttgtggtgtggatgaagcgtagagagaaggagcgacaggca
aagcccctgctgattgatcccgaggacgacgtcagagacaacatcctcaaatatgatgag
gagggagggggagaggaggaccaggactatgacctgagccagctgcagcagcccgagtct
ttagaccacatcatcaataagccagcaggggtgcgcagggtggatgagagacctgtgatt
gctgagtcacagtaccccgtcagacccagtctgccccaccctggagacataggagacttc
atcaatgacggtctgagggcagcagacaacgaccccacggctcctccctacgactccctg
ctggtgtttgactacgagggcagtggttcaactgccggctctgtcagctcgctcaactcc
accagctcaggggaccaggactacgactacctcaacgactggggccctcgcttcaagaag
ctggccgacctctacggaggaggggatgatgactga
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