Plectropomus leopardus (leopard coralgrouper): 121949894
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Entry
121949894 CDS
T07454
Symbol
polr3b
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03020
RNA polymerase
plep04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121949894 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121949894 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121949894 (polr3b)
Enzymes [BR:
plep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121949894 (polr3b)
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
121949894 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
121949894
NCBI-ProteinID:
XP_042351660
LinkDB
All DBs
Position
11:complement(25479501..25508119)
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AA seq
1132 aa
AA seq
DB search
MELLGGEFCDMTPQELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEVSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLXECQKAQIFTQTQALRYLGNKVRRQRMWXGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHHKLVNTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKR
GQPMVKNKHIEDLSQGYRNFEDFLHEGLVEYLDVNEENDCQIALYEHMINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAVTRKPIWRHSILDADGICSPGEKVENKQVLVNKSMPTVTQTPLE
GSTQLGQPQYRDVPISYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggagttgctcggaggagagttttgtgacatgactcctcaggagctggcggctcctgtc
aacactgtagcggaaaaatggaaactgttaccagccttcctgaaggtgaagggactggtg
aagcagcacatcgactcattcaactatttcatcaacgtggagataaagaaaataatgaaa
gcaaacgagaagatcacaagtgatgctgatcccatgtggtacctaaaatacctcaatatc
tacgttggcatgcctgatgttgaagaaagcttcaacgttaccagaccagtatctcctcat
gagtgtcgtctcagagacatgacctactcagcacccatcacagtggatatcgagtacact
cgtggcagtcagagaatcatccgcaatgcgcttcccatcggaaggatgccgatcatgctg
cgaagctcaaactgtgttctcacaggaaagacgcccatggaagtttctaaactgaatgag
tgtcctctggatccagggggttacttcattgtaaaaggtcaagagaaagtaattctgatc
caagagcagctgtccaagaatcgaatcattgtggagcaggacaggaagggtgcagtcgga
gcctccgttaccagctccactcatgagaagaaaagcagaacaaacatgattgtcaaacaa
ggcagattctacctgagacacaacacgctgtcagaggacgccccgattgccatcatattc
aagggtatgggagtagagagtgaccaggagatagtgcagatgatcggtacagaggagcac
gtcatggccagcttcgccccgagcctgngagagtgtcagaaggctcagatcttcacgcag
actcaggctctgaggtacctcggtaataaagtgcggagacagcgcatgtggngaggcccc
aagaagaccaagatggaggaggccagagagcttttggcgtctcttatcctcacacacgtg
cctgtcaaagagtttaactttcgggcaaagtgtatttacctggctgtgatggttcggagg
gtgatcctggctcaaggggacaacaaggtggacgacagagattactatggcaacaaacgt
cttgagttggccgggcagctcttgtctctactgtttgaagatctgtttaagaagttcaac
tctgaactgaagaaaatcgcagaccagatcatccccaagcagagagctgcacagttcgat
gtggtgaagcacatgcggcaggatcagatcaccaacggcatggtcaacgccatatccacg
ggaaactggtctctgaagagatttaagatggaccgtcagggtgtcacccaggtcctgtct
cgtctctccttcatttcagctcttgggatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcgggccgcgctccctgcagccgtcacagtggggcatgctgtgtccg
tctgacacccctgagggagaggcctgcggtctggtgaagaacttggctctgatgacccac
atcaccaccgacatggaggacggcccgatcatcaaactggcctttaacctgggagttgaa
gacgtcaacctgctgtgtggagaggagctctcctacccgagcgtcttcctggtcttcctc
aatggtaacattcttggtgtgattcgagatcatcacaagctggtcaacaccttcagactg
atgcgcagggcgggttttatcaatgagtttgtgtccatctccaccaacctgaccgaccgc
tgtgtctacatctcctccgatggaggacgtctctgcaggccgtacatcatagtgaagagg
ggacagccgatggtgaaaaacaaacacattgaagatctgtcacagggctacagaaacttt
gaagactttctgcatgagggcctggtggagtacctcgatgtgaatgaggagaatgactgt
cagatcgcactttatgagcacatgattaacaaagacacaacacacttggagatcgagccc
ttcacactgctcggggtgtgcgctggcctcattccctacccccaccacaaccagtcaccc
aggaacacataccagtgcgctatgggcaagcaggccatgggcactatcggctacaaccag
aggaaccgcatcgacactctcatgtacctgctggcgtaccctcagaggcccatggtcaaa
acgaaaaccatcgaactgatcgacttcgagaagctgcctgctgggcagaacgccaccgtg
gccgtgatgagctacagcggctacgacattgaggacgctctggtcctcaacaaagcctcg
cttgacagaggatttgggcgatgccttgtgtataaaaacgccaagtgcacgctgcggcgt
tacaccaaccagacctttgacaaggtgatggggcccatgctggatgctgttacccgaaag
cccatctggaggcacagcatcctggatgctgacgggatctgctcccctggtgagaaagtg
gagaacaaacaggtgttggtgaacaagtccatgccaactgtcacccagacaccactggag
ggcagtacccagctaggccagccccagtacagagacgtgcccatcagctataagggctca
acggactcgtacatcgagaaggtcatgatctcatccaacgctgaagatgctttcctcatc
aagatcctcctgaggcagaccaggagaccagaaatcggagacaaattcagcagccggcac
ggacagaaaggtgtttgtggtctcatcgttcctcaggaggacatgccgttctgtgacact
ggcatctgtccagatataatcatgaaccctcacggatatccctccagaatgacggtggga
aagctgattgaactgctggctgggaaggcgggagtcctggatggacggtttcactacggt
acggcctttggaggcagcaaggtgaaggatgtgtgtgaggatcttatccgctatggatat
aactaccagggcaaagactacgtgacctcaggaatcacgggggaacctctggaggcttat
atctactttggaccagtatattaccaaaaactgaagcacatggtcctcgacaaaatgcac
gctagagctcgaggcccccgagctgttctcaccaggcagcctacggagggccgctccaga
gatggaggtctgcgtctgggcgagatggaacgtgactgtctgatcggctacggagcgagc
atgttgctgctggagcgcctcatgatctccagtgacgcctttgaggtggacgtgtgcggg
cagtgtggcctgctgggatactccggctggtgtcactactgtaagtcttcctgccacgtt
tcctccctgcgtatcccgtacgcctgcaagctgctgttccaggagctgcagtccatgaac
atcatccctcgactcaaactgtcacgctacaacgagtga
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