Plectropomus leopardus (leopard coralgrouper): 121950105
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Entry
121950105 CDS
T07454
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121950105 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121950105 (myo5c)
04131 Membrane trafficking [BR:
plep04131
]
121950105 (myo5c)
03029 Mitochondrial biogenesis [BR:
plep03029
]
121950105 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plep04812
]
121950105 (myo5c)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121950105 (myo5c)
mRNA cycle factors
P-body specific factors
121950105 (myo5c)
Membrane trafficking [BR:
plep04131
]
Others
Actin-binding proteins
Myosins
121950105 (myo5c)
Mitochondrial biogenesis [BR:
plep03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121950105 (myo5c)
Cytoskeleton proteins [BR:
plep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121950105 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
121950105
NCBI-ProteinID:
XP_042351954
LinkDB
All DBs
Position
11:complement(6913289..6930219)
Genome browser
AA seq
1743 aa
AA seq
DB search
MALLELYTEYNRVWIPDADHVWKSAEIMRDFHIGDNVLELLLEDGTEHYYPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLHIYG
DAVIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKRYRIIGANMR
TYLLEKSRVIFQADDERNYHIFYQMCSCAHLPEFKRLRLLSADKFRYTCMGGEITIEGVD
DKKDMEETQRTFSLLGLKEDFQSDVFKVLAAILHLGNVEIRNSGDGKSSVPPSDPHLEIF
CELLGISAEELARWLCHRKIVLVAETVVKPVPKERAVNAKDALAKQIYAHLFDCIINRIN
TALKVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLHANPLFEKP
RLSNDAFVIQHFADKVEYQCRGFLEKNRDALYDELVDTMRVSKFPFLANFFREEGQSTVN
SKGVKVRPARPGVKPANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHLEADLSDKKQTCKNV
LQRLIQDPNQFKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSQRRKYLRMR
QAAIIIQQYIRGERTIRKTVSAATLKQGWASVVIQRYWRGYRMRQIYQLVRLASITIQAF
TRGWMARKQYKKMMEEQKALILQKYARAWLARRRFQTMRRLVLNVQLSYRVQKLKKKIEE
QSKENRGLMERLTSLANSHSHTVDRLQVVETQLEKSTNQRASLEAREKKAKEDATLTTAQ
LKKEIDALNLEKQNLEKKFETSTKEAKESFDQTKRDLLEEKEYEARLRKIAENNAEIQRQ
DHEKEVENLKEEIKRLKEERVSLHRKIEEAGQVNSDLQDQNIQLTKHVKIIPELRRDLNN
LQNQRNTMDRKIKQQSEQARAKMADITRRLLGGVVEEEVLLGLTPDDSEKIYEVEDLLAA
FDGLQKASRILENHQREQKESYETQMEGLKLKVDHLQNENSKLQSLFQEKSNVNESIRQE
VSRLSSENSVIPELKLQASELQRQKQELEARIEEQSRELEEKTEEITSILQRKIKEESLQ
RRHFEAKAEELEELKRELQGRLEELEEDNDHLKRQLLMEMEAKNKLRQETSQLTAENMDF
EEQLDQKDRVIRKLLNQIKSLETSQRAMKQTSTPATPKDYLGMLEYKREDESRLIQNIIL
DLKPKGVAVSMIPALPANILFMCVRHADYLNDEFKLKSLMNGIIGGVKKVVMNYHKDFEL
LSFWLSNTYQLLNCLKQYSGEEEFMKQNTPRQKKNCLKNFDLSEHRQILSDLAIQIYHQF
LSVMEKTLTPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSETHTISTIIQQLSVFH
STMSQHGMEQGLIKQAVKQMFFLIGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKE
KDLQSSNAIDTLRPLSQAAWLLQVNKSTDDDANEITEKCTELNPVQIVKILNSYTPIDDF
EKRVTSSFVRKVQSLLQDREGSTQLMVDSDYRFQVMFPFCPSSQALELLQVPSSLHLGFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggccttattggagctgtacaccgagtacaacagggtgtggataccagatgcagatcat
gtttggaaatcagccgagattatgagagactttcatattggggataatgttcttgaattg
cttcttgaagatggcactgagcactactacccagtcgacccatcaaaaccacaactgcct
ccactccgcaacccagacatcttggtgggagagaatgacctcactgctctcagctacctg
catgaacctgcagtactacacaaccttaaagtgcgatttgtggagtccagaatcatctac
acttactgtggtattatactggtggccgtaaatccatacaaacagcttcatatctatgga
gatgcagtcattcatgcctactcaggccagaacatgggagacatggacccgcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccataagaaccagtctatcatc
gtcagcggtgaatctggagctggtaaaacagtttctgctcgatacgcaatgaggtacttc
gctgttgtgagcaaatcaggaagtaaaactcgagttgaagacaaagtcctggcatccaat
cctataacagaggcaataggaaacgccaaaaccaccagaaatgacaacagcagccgtttt
gggaaatacacagagatcagctttgacaagaggtaccggatcattggagcgaacatgagg
acctatctcctagagaaatccagagtcatttttcaggcagacgacgagcgaaactatcac
atattctaccagatgtgttcctgtgctcacctgccagagttcaaacgtctaagactgttg
agtgcagataagttccggtacacctgcatgggcggtgagatcactattgaaggtgtggac
gacaagaaagacatggaggagactcagcggaccttctcactgctcgggttaaaagaggac
tttcagtcagatgtgttcaaagttttggcggccattctgcatttgggaaatgtggaaatc
agaaactctggagatggaaaatcatcagttcctcccagtgatccacacctggaaatcttc
tgtgagctgctgggcataagcgctgaggagttggcgcgttggctgtgccaccggaagatc
gttctggtggctgagacggtggtgaagccagtgcccaaagagcgggcagtaaatgccaaa
gatgcccttgccaaacagatctatgcccatctgtttgactgtattattaacaggataaat
acagcactaaaggttccaggaaagcaacatgctttcattggtgttctggacatttatggc
tttgaaacatttgacatcaacagctttgaacagttttgtatcaactacgcaaatgaaaag
cttcaacagcaatttaacttgcatgtgttcaagctggagcaagaggagtacatgaaagag
gacatcccgtggacgctgatagatttctatgacaaccagccggtcattgacctaatagaa
gcaaaaatggggatcctggacttgcttgatgaagaatgtttgtttccacagggcactgac
caaagctggctgcaaaagctgttcaactatcttcatgccaatcctctgtttgagaagccg
aggttatcaaatgatgcatttgtgattcaacactttgcagataaggtggaatatcagtgc
agaggttttcttgaaaagaacagagatgctctctatgatgaactggttgacactatgaga
gtcagtaagtttcctttcctggccaactttttccgagaggaggggcaaagcactgtgaac
agtaaaggtgtcaaagtgaggcctgccaggcctggagtgaaaccagccaataaacagctg
agaacctcagtgggagataagttctgcagctccctctctttactgatggaaacactgaat
gctaccaccccacactatgtacgctgcattaagcccaatgatgaaaagctcccatttgaa
tatgactccaggcgggtggtgcagcagctgcgagcctgtggagtccttgaaactattcgt
atcagtgcacagagctatccgtccaggtggacatacattgagttttacagccgatacagt
atcctaatgtcacatctggaggctgacctcagtgacaagaaacagacctgcaagaatgtg
ctgcagaggttgattcaggaccccaaccagttcaagtttggtcggacaaagatcttcttc
cgagccggtcaggtagcttatcttgagaagctgcgtctggaccgactgagaggagcctgt
gtgaccatccagaaacatgtccgcgggtggagccagaggaggaagtacctgcgtatgaga
caggctgccatcatcatccaacagtacatccgtggggagaggacaatccgtaaaactgtg
agtgctgcaacattgaagcagggctgggcatcagtggtgatccagagatactggagaggt
taccgcatgagacagatttaccagttggtccgtctggcctccatcaccatccaggccttt
acacgaggttggatggcccgtaaacagtacaagaagatgatggaggagcagaaagctctg
atactacagaagtatgccagagcgtggctggcacgacggcgttttcaaaccatgcgtcgg
ctggttctcaacgttcagctctcctacagggtacagaagctcaaaaagaagattgaagag
cagagcaaagagaaccgtggattgatggaaagactgacaagcttggccaattcccattct
cataccgtggacaggcttcaggttgtagagacacagctggaaaaatcaaccaaccagagg
gcgtctttggaggcgagagagaagaaagcaaaagaagatgctactctgacaactgcccag
ctcaagaaagaaatagatgctctcaaccttgaaaagcagaacttggagaagaagtttgaa
acttccaccaaagaggccaaagagagctttgatcaaacaaagagggacctcctggaggag
aaagaatatgaagcaaggctcagaaaaattgcagagaacaacgctgagatccagagacag
gaccatgagaaggaggtggaaaatctgaaagaggagattaagagattgaaagaggagaga
gtcagtctgcacagaaagattgaggaggcgggccaggttaactctgacctgcaggatcag
aacatccagctcaccaaacacgtcaagatcattcccgagctacgcagggatctcaacaac
ctgcaaaaccagagaaataccatggaccgaaagataaagcaacagtcagaacaagcaaga
gctaaaatggccgatattacgagacgacttcttggtggtgttgtcgaagaagaagttctt
ttggggctaactccagatgactctgagaagatttatgaagttgaagatttgctggcagcc
ttcgatgggctgcagaaagcatccagaatactggaaaaccaccagagggagcagaaggag
agctatgagacccagatggagggcttgaaattgaaagtggaccacctccaaaatgagaac
agcaagttgcaaagcctgttccaggagaaaagtaatgtcaatgagagcattcgccaagaa
gtgtccaggctcagcagcgagaactcagttattccagagctgaaactgcaggcttcagag
ctgcagagacaaaaacaagagttggaggcccgtatagaggagcagagcagagaactagag
gaaaaaactgaggagatcactagcattcttcaaaggaagattaaagaagagagcttacaa
cgcaggcactttgaggcgaaagctgaagagctggaggagctgaagagggagcttcaaggc
agattagaggagctggaagaggacaatgatcacctgaagagacagctgctgatggagatg
gaggccaagaacaaactgagacaggagacttcacagttgactgctgagaacatggacttt
gaagagcagcttgaccagaaagacagagtaataaggaaactcctgaatcaaataaaaagc
cttgaaacatcacagagagcaatgaagcaaacatctacgcctgccactcccaaagattac
ctcggcatgttggagtacaagagagaggacgaatccaggctcattcaaaacattattctg
gacctgaagcccaaaggtgtggcagtcagtatgatccctgccctgcctgctaacatcctc
ttcatgtgcgtccgccacgctgactacctgaacgacgaattcaaactcaagtctcttatg
aacgggatcatcggaggtgtcaaaaaggtcgtcatgaattaccacaaagactttgagctg
ctgtcgttctggctctcaaacacatatcagctgctcaactgcctgaagcagtacagcggg
gaggaggagttcatgaaacaaaatactcctcgccagaaaaagaactgcttgaagaatttt
gacttgtctgagcacagacagattctcagtgacctggctattcaaatctaccatcagttt
ctctcggtcatggagaagacacttactcctgcaatagtacccggtatgttggagcacgag
agcttacaggggatttccagcatgaagccgacaggcttcaggaagcggtccaacagcatc
tatgaggactcggagacgcacaccatctctaccatcattcagcagctcagtgtcttccac
tccactatgagccagcatggcatggagcagggcctcatcaaacaggctgtcaagcaaatg
ttcttccttattggtgcaaccaccctcaacaatatcatgctccgcaaagatatgtgctcc
tgcaggaagggaatgcaaatcaggtgtaacatcagttacctggaggaatggctgaaggag
aaggacctgcaaagctctaatgctatagataccctgaggccgctgtctcaggccgcctgg
ctactgcaggtcaacaagtccactgatgatgatgccaacgagatcactgaaaaatgcact
gaactcaaccccgttcagattgtcaagattttgaactcctacacacccattgacgatttt
gagaaaagagtgacatcgtcatttgtccgtaaagttcagtcattactacaagatcgtgaa
ggatccacacagctgatggtcgactcggattatcgcttccaggtcatgtttcctttctgc
ccatcctcgcaggctctggagctgctgcaggtcccgagcagccttcatctgggcttccta
accaggatctga
DBGET
integrated database retrieval system
