Plectropomus leopardus (leopard coralgrouper): 121950257
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Entry
121950257 CDS
T07454
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121950257
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121950257
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
121950257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
121950257
NCBI-ProteinID:
XP_042352135
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All DBs
Position
11:9682581..9883078
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AA seq
940 aa
AA seq
DB search
MCADCSTPCAEKEPICQVLTAGEMESQTKVPTALRGDEGVCKKGCGLLLSGEPDHCCMDA
LRTVTDALEERSAALEHETRMARLRWNRREQSLLAQVSTLQNEAQLAALKYQSRLHQYML
HINSIAEQVTGYYKRDVRAAADMQSQISDEATCAEGEPREQLQTPQLPSHSGGETNSLLQ
RQTVTSDVYKCLTTTVEEKSVNGKELSKSSHEETVEAFRAAKDPVVVQVIRRTPSGRPHG
LPQEIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDVCPFLLSDSCHSLHTMDQDYYEGT
DYLSPVPADGERTEEFEYEEVELCRLNSQEKLGLTLCYRTDEEEDVAIYVSEISPNSIAA
RDGRIREGDRILQINGQDVQDREEAMAALSSDESRNIVLLVARPEMQLEEAWLDDEHSEF
LEQLKMEMLEEQQREEMELAALQEEQENEQRVDDDRPTCSTLPHHKDSVLSRKDRMESSE
HNVLAHIQRRLSQCLRDNRDTHHTTSSTRLEDKEDEDDDEMEGDRFQQLLELKCQIRNSG
EYDLFYSRRSTIECSMGEQGGVQHELRMLNEELRSIELECQNIMQAHNLRKSQQSSSMGH
SAPSSKNQSPHRSDPTKSKLADINERLEKSDKDSSSAYNTAESSRSTPLAMDRSPEHSLQ
RMVSLTNQRNLCSGLATGPLLSPSPVPACRASVPGKSSSPDHSSRSQSNQTTQAEEESRG
KLKQLASQIPYFSPSHSSQQRQVNIPAHARHYQSYMQLIQQRSAVEYAQSQLSLLSVCKE
PQRPINEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEERSGGMTTDDDAMSEMK
MGRYWSKEERKQHLVRAKEQRKRREFMQRSRLESLKENPQSSSEGRKEVSIIELSQKKMM
KKRNKKILDNWMTIQELMTHGTKAPEGAKVHNAFLSVTTV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgctgattgctcaactccctgcgcggaaaaggagccaatctgtcaagttttaacc
gcaggcgagatggagtcgcaaactaaagtaccgacggctctccgcggtgatgaaggtgtt
tgtaagaaaggatgcgggcttctgctgtccggtgaaccggatcactgctgtatggacgcc
ctccgcaccgtcaccgacgccctggaggagagaagcgccgctttggagcacgagacccgg
atggcgaggctcaggtggaaccggagggagcagtccctgttagctcaggtgtccactctg
cagaacgaggcccagctggcggctctaaagtaccaaagcagactgcatcagtacatgctg
cacatcaacagcattgcagagcaggtcactggctactacaagagagacgtgagggcagct
gcggacatgcagagccagatatcagatgaagcaacatgtgcagagggagagccacgggag
cagctccaaacacctcagctgcccagtcacagtggaggagagacaaacagcctactgcaa
agacaaaccgtcacatctgatgtgtacaaatgtttaacaacaacagtggaggagaaatct
gtgaatgggaaggagttgtctaagtccagccatgaggagactgtggaggcctttcgtgct
gccaaggaccccgtcgtggtgcaggtcatccggcggacccccagcggccgcccccatggc
ctccctcaggaaatccatgtggtggatgtgtgcactcagaccgacatcacctttgaacac
atcatggcgctggcaaagctccggccctcaacccctcctgtgcctgacgtctgtcccttc
ctgctctctgacagctgtcattctcttcatacaatggaccaggattactatgaagggaca
gactacctctcccctgttccagctgatggagagaggacggaggaattcgagtatgaggaa
gtggaattgtgtcgacttaacagccaagagaagttggggctaactctgtgctacagaaca
gatgaagaggaggatgtggccatctatgtcagtgagatcagtccaaacagcattgctgct
agagatggacgcattcgagagggggatcgcattttacagattaatggccaagatgtacaa
gacagagaggaagcaatggctgcactctccagtgatgagagcaggaacatcgtactgctg
gttgccagacctgagatgcagctggaggaggcctggctggatgatgagcacagtgaattc
ctggagcagttgaagatggaaatgttggaggagcagcagagggaggagatggaattggct
gccttacaggaggaacaggagaatgagcagagagtggacgatgacaggcccacctgttcc
acactcccccatcataaggatagtgtactgagtagaaaagacagaatggagagctcagag
cataatgtcttggcacacatccagagacgtttgtcccagtgcctaagagacaatcgggac
acacaccataccaccagctccacacggctggaggacaaagaggatgaggatgatgatgag
atggagggtgatcgtttccagcagctcctggagctgaagtgtcagatacgtaacagcggt
gagtacgacctgttctacagccgccgcagcactattgagtgcagcatgggggagcagggt
ggagtacagcatgagctacgaatgctcaacgaagagctgcgcagcatcgaacttgaatgt
cagaacatcatgcaggcccataaccttcgtaagagccagcagtcttcctccatgggccac
tctgcaccctcatccaaaaaccaaagcccccatcgaagtgaccctacaaaaagtaagctg
gctgacataaatgaaaggcttgaaaaatcagacaaggacagctctagtgcctacaacacg
gcagagagttcacggagcacccctctggcaatggaccgctccccagagcactcactccag
aggatggttagtctcaccaaccagagaaacctctgcagtggccttgccactggcccctta
cttagcccaagccccgtcccagcatgccgtgcttcagtcccagggaaaagcagcagcccc
gaccacagcagccgttctcaatcgaaccagacaactcaggctgaggaggagagcagaggg
aaattaaaacaacttgcttcccagattccttacttctctccatcccacagttcccagcag
aggcaggtcaacatcccagctcatgcacgccactaccagagctacatgcagctgatccag
cagcgctcagctgtggagtatgctcagagccagctcagcctgctcagtgtctgcaaagag
cctcagaggcccattaatgagcccaagatggagtggaaggtcaagatccgcagtgatggt
acacgctacatcaccaagaggcctgtgagagacaagatcctgagggagcgagccctaaag
attaaagaagaacgtagtggggggatgaccacagatgatgatgcaatgagtgaaatgaag
atggggaggtactggagtaaagaggagagaaagcaacacctggtcagagcaaaagaacag
aggaaaagacgcgagttcatgcagcgtagtcggctggaaagcttgaaagagaaccctcag
agcagtagtgagggtcgcaaggaagtcagcattatagagctcagccagaagaagatgatg
aagaaacgcaacaaaaagatcctggacaactggatgaccatccaggagctgatgactcat
ggtactaaggcccctgagggagccaaggtgcacaacgccttcctatcagtcactactgta
taa
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