Plectropomus leopardus (leopard coralgrouper): 121950295
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Entry
121950295 CDS
T07454
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121950295 (lingo1a)
Membrane trafficking [BR:
plep04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121950295 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
LRR_9
Ig_2
LRR_Zer-1
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
121950295
NCBI-ProteinID:
XP_042352173
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All DBs
Position
11:complement(12796748..12874448)
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AA seq
615 aa
AA seq
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MAAGEATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTVPE
GIPAETKLLDLSKNRIRTINPDEFATFANLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLRHLNINVIRDYSFKRLYRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITTKTIGRLSVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPTETGANGTRAN
APFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SSTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggggaagcgactgggcacagctacctggtggcttgctggcagcccattctg
atcttgatgctgggcaccgtgctgtctggctccactacaggctgtccatcccgctgtgag
tgcaatgttcaagagcgctctgtgatgtgccaccgcaagaagctcatgacagttcccgag
ggcattcctgcagaaacgaaactgctggacctcagcaagaaccgcatcagaaccatcaac
ccagacgagtttgccacctttgccaaccttgaacacctggagctcagtgaaaacacgatc
tctactattgaacccggagcattcaacaacctttacggcttgcggacattggggctgcgt
agcaacaagcttaagctgatccagctcggtgtcttcacaggcctgagcaatctcacgcag
ctggacataagtgagaacaagattgtcatcctgttggactacatgttccaggatttgtac
aaccttcggtctttagaggtgggtgacaacgacctggttttcatctcccaccgggctttt
catggcctaagtagccttgagcacctgagtcttgagaagtgcaacttgtcctctgtgcca
acagaggcttttacccaccttcacagtttgatcactctcaggctgcgccaccttaatatc
aatgtcatacgggattactcctttaaacggctctatcgcctcaaagtgttggaaatagcc
aactggccatatctggatacgatgaccccaaattgcttgtatggattaaatctcacctcc
ctgaccattgcaaatgccaacctaaccacgattccctatgtagccctgcggcacttggtt
tacttgcgctttcttaatctttcatacaatcctatccataccattgaggggaataagctc
catgatcttctgcgtctacaggaatttcacttggtaggaggtagactggcaatgattgag
ccctactctttccgcggtctaaactacctgaagattctaaacgtgtctggaaactctctt
agtactttagaggagtcggctttccattcagttggcaacctggaaacccttgccctgtat
gataatcccctggcctgcgactgccgactgttatgggttttccgacgacgctggagactg
aacttcaacaggcaacagcctacctgtgcctcccctgagtttgtccaaggcaaagaattc
aaagacttcccggatgttctgcagcccaactacttcacgtgccgcaagtcgaggattagg
gatcgcaagccccagcagaaatttgttgatgagggagccattgttcattttgcttgccaa
gcagatggagatcctgctccagtgattatgtggctatccccgcagaaaaagtttatcacc
accaaaacaattggaaggctctccgtgttgccagacggtaccctcgaggttcgctatgcc
cagattcaagacaatggcacatacgtgtgtatagcaagcaatgcaggcggaaatgacacc
tctcttgctcacctgcacattcacagctactcgcctgactggccccaccaacccaacaag
acgtttgccttcatctccaaccagcccacagaaactggtgctaacggtacaagagccaat
gcccctttcccctttgatataaagacgttgatcattgcgaccacaatgggctttatttct
tttctcggtgtcgtcttgttttgcttggtactgctcttcctttggagcagaggtaaaggc
aacactaagcacaacatcgagatcgagtacgtgccacggaaatcggacgctggcatgagc
agcagcacagtggatgctcctcgcaagtttaacatgaaaatgatttaa
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