Plectropomus leopardus (leopard coralgrouper): 121950452
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Entry
121950452 CDS
T07454
Symbol
ctcf
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121950452 (ctcf)
03036 Chromosome and associated proteins [BR:
plep03036
]
121950452 (ctcf)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121950452 (ctcf)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121950452 (ctcf)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
zf-C2HE
zf-C2H2_6
FYDLN_acid
zf-C2H2_15
Teflon_C
zf-C2H2_ZN142
zf-C2H2_CASZ1
DUF8106
Motif
Other DBs
NCBI-GeneID:
121950452
NCBI-ProteinID:
XP_042352387
LinkDB
All DBs
Position
11:28649082..28663897
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AA seq
843 aa
AA seq
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MDGGPTEGVGVVEVPSKDFPSIQAVHSQDAMVADLLQQAAEAGGVVEGQAGVVLEQGHGE
GMVAATQAQQQLMEAGVGVGVEGGAGVEMMVMDSLDPTLLQMKTEVIDAAVGGSSATVGV
VGGVAGAAHQATVTTVDQTQIITLQVVNMEEQAALGLGELQLVQVPVSATTVEALQQGTF
VDTTAMPKDGDPVICHTLPLPEGFQVVKVGANGEVETVEQEEGGEAHPGEEEDEEVGNQL
LEEGEDEPIPPPTDDPNWAKDPDYQPPSGAIKKTKKGKKSRLRYAEGDKDMDVSVYDFEE
EQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTD
ERPHKCHLCGXAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKP
FKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECY
ICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCR
YCDAVFHERYALIQHQKSHKNEKRFKCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEK
TFRQKQLLDMHFKRYHDPNFVPTAFVCPKCSKTFTRRNTMARHAENCSGEVEEAENGAPA
QKKGRRGRKRKMRSRRDDDDSDEDHVEPDEDEEGDGEDEAALLQEEEEPESIELDQAPAA
IPVPAPDEPPVKRKRGRPPKNAPKPPTPSKSVRVASKATASAAAIIQVEDESTGAVENII
VKKEDGDAAAATSLEQGVALTVEGVGLDGEGVETVELAVNEETAAAAANGDLTPEMILSM
MDR
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggacggagggccaacagagggtgtaggggtggtggaggtcccttccaaagacttcccc
tccatccaggccgttcacagccaggatgccatggtggctgacctcctccagcaagctgca
gaggccgggggtgtggtagagggacaagctggagtcgtcctggaacaaggtcatggggaa
ggaatggttgcagccacccaggcccagcagcagttgatggaggctggggtgggagtgggt
gtggaaggtggagcaggggttgaaatgatggttatggactcactggatcccaccctgttg
cagatgaaaactgaggtgatagatgctgcagtgggcggatcatctgcaactgtgggtgtt
gttggaggggtagcgggtgccgctcaccaagcaactgtaacaactgtggaccagactcaa
ataatcacactacaggtggtaaatatggaggagcaggcagctctgggacttggggagctc
cagctggtccaggtgcctgtttctgccaccaccgtggaggccctgcagcagggcaccttt
gtagacaccactgctatgccaaaggacggagacccagtcatctgccacaccctgccgctg
ccggagggctttcaggtagtaaaggtcggtgctaatggggaggtggagacagtggagcag
gaagagggaggagaagcccaccctggagaggaggaggatgaggaggtgggaaaccagctg
ctggaagaaggagaggatgaacccatcccacccccgactgacgacccaaactgggccaaa
gacccagactatcaacccccatctggagccattaagaagaccaagaagggtaaaaagagc
cgtctgcgttatgccgaaggcgataaagacatggatgtcagtgtctatgactttgaagag
gaacagcaggagggccttctgtcggaggtcaatgctgagaaagtggtgggcaacatgaaa
ccaccaaaacccaccaagatcaagaagaaaggagtgaagaagacgtttcagtgcgagctg
tgtagctacacttgccctcgacgttccaacctggacagacacatgaagagccacacagac
gagagacctcacaaatgtcacctgtgtggangagccttcaggacggtcactctgctaaga
aaccatctcaacacacacactggaactcgtccacacaagtgcacagactgtgatatggct
tttgtgactagcggagagttggttcgtcatcgtcgctacaaacacacacacgagaaaccc
ttcaaatgctccatgtgtgactacgccagtgtggaggtgagcaaactaaagcgtcacatt
cgttcgcacaccggtgagcgtccattccagtgcagtctctgcagctacgccagcagagac
acgtacaagctgaagagacacatgaggacacactcaggcgagaaaccttatgagtgctac
atctgccatgcccggttcacccagagtggaaccatgaagatgcacattctgcagaaacac
acagagaacgtggccaaattccactgtccgcactgtgacaccgtcatcgcacgcaagagt
gacttgggtgtccatcttcgtaagcagcactcattcattgagactggaaagaagtgtcgt
tactgcgacgccgttttccacgagcgctacgctctgatccagcatcagaagtctcataag
aatgagaagaggttcaaatgcgacatgtgtgactactgctgccgccaggagcgtcacatg
gtcatgcatcgtcgaacccacactggagagaaaccgtacgcctgcagccagtgtgagaag
accttcagacagaagcagctactggacatgcacttcaaacgctaccacgaccccaacttt
gtccccaccgcctttgtctgccccaaatgtagcaagacctttactcgaaggaacaccatg
gctcgccacgctgagaactgcagcggtgaggtggaagaagcggagaatggagctccggcc
cagaagaaaggcaggagagggaggaagaggaagatgaggagcaggagagatgatgatgac
agtgacgaggatcacgttgaacctgacgaggatgaggagggtgatggtgaagacgaagcc
gcgctgctacaggaagaggaggagccagaaagcatcgaactggaccaggcccctgccgcc
atcccagtacccgcccctgacgagccgccggtcaagaggaaacgaggcagacccccgaag
aacgccccgaagcctccaacacccagcaaatcagtcagggtggcttccaaggcgactgcc
tctgccgctgccatcattcaggtggaggacgagagcaccggagcagtggagaacatcata
gtgaagaaggaggatggcgacgctgctgcagccacgtctctggagcagggtgtggccctg
accgtggagggggtggggctagacggggagggggtggagactgttgagctggccgtgaat
gaggaaacagcggcggccgccgccaacggagatctgacgccagagatgatcctcagcatg
atggaccggtga
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