Plectropomus leopardus (leopard coralgrouper): 121950453
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Entry
121950453 CDS
T07454
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04110
Cell cycle
plep04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121950453 (smc1b)
04114 Oocyte meiosis
121950453 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plep03036
]
121950453 (smc1b)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121950453 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
121950453 (smc1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
121950453
NCBI-ProteinID:
XP_042352388
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All DBs
Position
11:complement(15481196..15498242)
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AA seq
1243 aa
AA seq
DB search
MGYLKQIDIENFKSWRGNQVIGPFMRFNCIIGTNGSGKSNVMDALSFAMGERVASLRVNR
LRDLIHGAHIGRPVQDTARVAIRYCDDNDQETIFCRSIIGDSSEFRINGIHVTLAKYIEE
LKKIGIVTKARNCLVFQGAVESIALKNPKERTKMFEYISQSEDCIAEYDKKKNALLKAKE
DTLFHFNKKKSATIERKQVSQEKTEAQRYQALVDELHQNRLQLSLAELYYNEKGISALSD
TLREKQQAAAAKNNKVVNAEHTVKTYKKEHGRLYREQQHIDKEISAQEHSLSQCQSLYIK
AKVNTSHHMQRAEEVRDALRKGQRLMAVKEQELAEGQQEISELERTWRNYERQVQERGAS
LGRDIELDEDQVRRYNELKELARKQGMVLSQQAEKLQWEVRSDYEKMAFDQRRKKEVEVA
IRNHRTQLEDLTHRAEKLEEYTSTCTTSIEEYRQREESLSAELQRGRQRTEEVTQELGQV
LEELKNACMDTEESSRQLQRKALLEKLRRLYPESVFGRLSDLCSPIHKKYQLAVTKAFGH
NMNAIVVSSEKVARDCIRFMKEERAERETFLPIDYLDVSPLNERLREIPHAKMVVDVVKI
STASAAAAPLRKVVQFVCGNALVCETIKEAKSVAFDGPVRLKTVALDGTMFTKSGLISGG
SSDLRTKARCWDERDMMKLRERKDQLTAELRDLMRLRRKDSELNQIIAQAQGAQTRLKYS
KAELENLCKKNILKCQVEISRMKSELANLDSQIQMQQECVEAKDSEIREIRDRINQMEDM
VFSDFCVEIGVDSIREFEREHLKQQTELDKKRLEFESQSTRLKAQLEYEQDQLEQQRKKL
HNMEKTMDKEERSMADQRKDEEKLLAAVEEGQSKLLELKNQLLSKKSQVAAAKAELDQKT
KSLHEINKELVKLQREVMSAETAVEQKRLFRHNLLLACKIQSLPITLLSGSLREISEVEL
DTESESTSATVNIYEREAQVVIDYSDLDAELRSLQGDEEIEANLERLKESVSSIEGVLHR
TTAPNLKALAKMREVKVKLQEVTEALDASTMELRKCGKDFNQVKDRRLQLFRQCFEHVSL
VIDQIYKRICRNSSAQAILSAENSEEPYLDGISYHCVAPGKRFMSMDNLSGGEKAIAALA
LVFAIHSFCPAPFLIMDEVDAALDNTNIGKVTSFIREESRRNMQIIVISLKEEFFCRADA
LLGVYSDFNECMFSGLLTLDLQPYPLAEEDSGSQADSAKSGFV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggggtatctgaaacaaattgatattgagaacttcaagtcatggcgaggaaaccaagtt
atcggtccttttatgcgatttaattgtataattggcacaaacggctccggtaagtccaat
gtgatggacgccctgagcttcgccatgggggagcgggttgcttctctccgggtgaatcgc
ctcagggacctgattcacggagcccacatcgggcggccggtgcaggacaccgcccgtgtc
gccatccggtactgcgacgataacgatcaggagaccatcttctgccggagcatcattggt
gactcctctgagtttcgcatcaatggcatacatgttactctggccaaatatatagaggag
ctgaagaagattggcattgtgaccaaagctcgaaactgtctggtgttccagggggcagtg
gagtccatagctctgaagaacccaaaggagaggaccaagatgtttgagtacatcagtcag
tcagaagactgtattgcagagtatgataagaagaaaaatgccctgctgaaggccaaagag
gacacactgtttcacttcaacaagaagaaatctgctactatcgagaggaaacaggtgtcc
caggaaaaaacagaggcccaaaggtaccaggcgctggtggacgagctccaccaaaaccgt
ctgcagctgagcctggctgagctctactataatgagaagggcatcagtgctctcagtgac
accctgagggagaaacagcaggcggcagctgctaagaacaataaagttgtgaacgcagag
cacacggtcaaaacctataagaaggaacatgggcgcctctacagagagcagcagcacata
gataaggagatcagcgcccaggagcattccctgtcccaatgtcaatccctatacatcaaa
gccaaggtaaacacctcccatcacatgcagagggctgaggaggtccgtgatgccctgagg
aagggtcagaggctgatggcagttaaagagcaggagctggcagaggggcagcaggagatc
tctgaactggagaggacctggaggaactatgagaggcaggtacaggagaggggagcttcc
ctggggagagacatcgaactggatgaggatcaggtgaggcgatacaacgagctgaaggag
ctggcccgaaaacaggggatggtcctcagccagcaagcagagaaactgcagtgggaggtg
agatcagactacgagaagatggcttttgatcagcgcagaaaaaaggaagtggaggttgcc
atcaggaaccaccggactcagctggaagatttgacacacagagcagagaagctagaggag
tacaccagcacctgcacgacctctatcgaagagtaccgtcagcgggaagagagcctgagt
gcggagttgcagcggggccgtcagcgcactgaggaggtgacccaggaactaggtcaggtg
ctggaggagctgaagaatgcctgtatggacactgaggagagcagtcgccagctgcagcgc
aaagcactgctcgagaagctccgcaggctctaccctgaaagcgtgttcggtcgtctctct
gacttgtgcagccccattcataagaagtaccagctcgctgtcaccaaggcttttggtcac
aacatgaacgccattgtagtgtcctcagagaaagttgcccgtgactgtatcaggttcatg
aaggaggagcgagctgagcgtgagacttttctgcccattgactacttggacgtaagccct
ctgaatgagcgactaagagagatcccccacgccaagatggtggtcgatgttgtgaagatt
agcactgcctcagctgctgctgcccccctgagaaaggtggtgcagttcgtatgtggcaat
gcattggtgtgtgagaccatcaaggaagcaaagagtgtggcctttgatggacctgtgcgc
cttaaaacggtagccctggatgggacaatgtttacaaagtcgggcttgatctctggaggc
tccagtgacctgcggaccaaagctcgttgctgggatgagagggatatgatgaagctgagg
gaacgcaaggaccagctgacagcagagttgcgcgatttgatgaggctgaggcggaaagac
tcagagctaaatcagatcattgctcaggctcaaggcgcccagacccgcctcaaatactcc
aaagctgagctggaaaacctttgcaagaaaaacatcctcaaatgccaagtggagatttca
cgtatgaagagtgaattggcaaacctggactctcagatccagatgcagcaggaatgtgtt
gaggcaaaggattcagagataagggagatcagagacaggatcaaccagatggaagacatg
gtgttttctgacttctgtgttgagatcggtgtggacagcatcagagagtttgagcgggag
cacctgaaacagcagacagagcttgacaagaaacggctggagtttgagagtcagagcact
cggctgaaagcgcagctggagtatgaacaagaccaactggagcagcagaggaagaagctc
cacaacatggagaaaacgatggacaaggaggagagaagcatggctgatcagaggaaggat
gaagagaagctgctggcagcggtggaggagggtcagagcaaactgctggagctgaagaac
cagctgctatctaagaagagccaggtggccgctgccaaagctgagctggaccagaaaacg
aagagcctgcacgaaatcaacaaagagttggtgaagcttcagcgggaagtgatgtctgca
gagacagccgtggagcagaaacgcttgttcagacacaacctgctgctggcctgtaagatc
cagagtctgcccatcactctgctgtcagggagcctccgtgaaatcagtgaagtggagctt
gacacagaatctgaaagcacttcagccaccgtgaacatctatgagagagaggcacaagta
gtcatagactactctgacctggatgcagaactcagaagtctgcagggagacgaggagatt
gaagccaacttagagaggctgaaggagtcagtctcctccatagagggagttctgcatcgc
accacagcccccaacctgaaagctctggcgaagatgagagaggtgaaggtcaagttacaa
gaagtgacagaggcgcttgatgccagcaccatggaattaagaaaatgtggtaaagacttc
aaccaagtcaaagaccgtcgtttacaactcttccgccagtgctttgaacacgtgtccctc
gtaattgatcagatctataaaagaatatgtaggaacagcagcgcccaggccattctgagt
gcagaaaattcagaggagccgtacctcgacggcatcagctatcactgtgtggctccaggg
aagcgcttcatgtccatggacaatctgtcaggtggagaaaaggccatcgctgccctcgcc
ctggtgtttgccatccacagcttctgccctgctccgttcttgatcatggacgaggtggat
gcagccctggacaacactaacattggcaaggtgaccagtttcatcagagaggagtccagg
aggaacatgcagattatcgtcatctccctgaaggaggagtttttctgcagggcagacgct
ttgctgggagtctactcagattttaatgaatgcatgttcagcggcctgctgaccctggac
ctgcagccctatcctctggctgaggaggacagcgggagccaggcggactcagcgaagtca
ggatttgtgtag
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