Plectropomus leopardus (leopard coralgrouper): 121950594
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Entry
121950594 CDS
T07454
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5
KO
K22615
NLR family CARD domain containing 5
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
plep04054
]
121950594 (nlrc5)
Pattern recognition receptors [BR:
plep04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121950594 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
LRR_4
Atypical_Card
LRR_NXF1-5
NOD2_WH
AAA_30
ABC_tran
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
121950594
NCBI-ProteinID:
XP_042352573
LinkDB
All DBs
Position
11:30963222..30999186
Genome browser
AA seq
1687 aa
AA seq
DB search
MDKEFDPDDENVNVVLAQESSELLHILSSESPAIIMKLCQMMPTDARGNLNLASTSCSEA
AVEEQIKAMLDYLRLANAADCRNFLQSMCMLCENIPMRLESRLMSVAGYASNVGENSSPR
VTHGISSLPPTEQQLIKRPRIDYWEQYIAAVMRLLQRRWDRLRVHLVKEVQLENVWVSLR
MTSRGREKLDQTPGSADKGGRTPEPDGDYWSTDSRVTLENFLQGCAGKVTVLVGQAGSGK
TLLMSCLGKQWAHGLGPIPSSYLFVLLEFRQLNVLSQPLSLSELLFRHCLHPKGGNEEKR
AIVDYLLSNPEQSCWVLDGYDEFHSKVPTQDVKRELLDPEKQMPVADLISGLLNRQLLPG
CTVVVTCRTRHASDLEGVSDKVGQLLGWDSYAIKEYVENFFRLKGHSANKALGEQAADLL
LSSQHLLAMSSLPALCNICCICLEHLLLVGGDPGRTQITEERGGETKRKVRRKEEKEAQI
PEEGRGEDGDRGASYVHRGDQGVRRGGGEDIMMDGTNGRAQLPPTQAQIPSTLTQVYLTV
LGAFLSRDPDRRGGNDEPVTMRLPESITCTLTALSRYRSELCELSQLAWEGLENSKILFT
EEDISQDVLEFSIRTGLFSQVDLRREDGMLVSCYCFIHLTLQEFLAALRIMTSTDVSDAQ
LKKRFSLRTRWMTKSDQRTVFTGSLHQYICGLASPQCTAALAQLARTSGGTGGQSWVQKR
QTLVVKLLKNLCSNTLTGPKILELCHCVQESQDTQLAKQVMGTRSTLELRNIRLLPNDID
ALAFVVNSVGDSGIGLDFGACSMEMECLDVLPRCQHIHYLSFRSRKYGDKFAEKLASILP
KFTSLKKLEFCGASLTATGAASLASALPNCPDITEINLNDNNLKDTGIKHIADIFSKQPR
LVSVRLGRNNSSLEAVDYLIRKMSSCLNIQQLHADGIKELKVTFSQNSDRNSHKTKSEPT
ISLLNQKWSKPEMQTVAKSLTRCPALSVLDMSGDLMDVECLRTLTQFLPKITIIKKIIVN
DSCSSVEGLVLLTALLSGCPAVVELHIRLQSPVQASIVFSEGREKPAHEMSKMLCLSCCG
LLPSHLDRVWRSLGTSSDLTLLDLSSNRLGNRGLRKLLDVLPCLRSIQEVNASNNEIGME
GVVMLAGALCSHHNLIQIHISDGGREQVILKFCSGKRGDKQQLKMFRINNSSLVPSDIST
LCRRLVQCRSRVELDLSHSTLSDSAIENLLKVLPKMMSLQRINVSHSITSTSGALMLVRC
LMISQRVTSVELRPQTESFIQFDSVKTEEASCRLTHCSLNADNVEELLEILQQGPQLSDL
DLSNNQLDDEGVKSFLVSLQNLKITGYVNLSHNGLSQQGLLEVAGMLCVCDSISAVDVSL
GAEERCLIWFTQHEASVKTLSVRESSLERDHLIRLAEIVSVCPRLTKLEFRNNLLQSDWI
EDFVRLLNSSQRGFSVSIEECWIRSEEAVGLLCRCLDLCSNIQTIRIHHTTLHLFLMKST
ELTSVSDDSADVTPSMATEKIGLVDCAVDGYQLESMKNIILQCPLLTELDFSHNSMGIEG
AEFFYAVLPSLPNLTSLSIGSKETCVTAFEKLSEAVLQAAAIQCLNLSGHVISDTATQIM
TTALPRLRSLNLSHCVWSAAGGLRLVQTLQDCIRLENLCLDSLQLNEEGTLYLAHALRNI
SSIRSLK
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atggataaagagtttgaccctgatgatgaaaatgtgaacgtcgtcttggctcaggaatcc
tcagaactgcttcacatcttaagcagtgagtcaccagcaataataatgaagttgtgccaa
atgatgcccactgatgctagggggaacctcaacctggcctccacaagctgttctgaagct
gcagtagaagaacaaatcaaagccatgttggattacttaaggctggccaacgctgcagat
tgccgcaacttccttcagagcatgtgtatgttgtgtgagaacatccccatgcgcctggag
tcgaggctcatgtcagtggctggatatgcaagtaacgttggtgaaaactccagtcccagg
gtaacgcatggaatatcatcattgccgcctacagaacagcagctcatcaaacgcccgcgg
attgattactgggagcagtacattgctgcagtgatgcgtttactgcaaaggaggtgggat
cgactccgtgtgcacctggtaaaggaggtccagctggagaatgtgtgggtcagcctaaga
atgacgagcaggggcagggaaaaacttgaccaaacccctggatcagcagacaaagggggc
agaacaccagagcctgatggggattactggtctaccgattccagagtgactttggagaac
ttcctgcaggggtgtgcagggaaggtgacagttctcgtcggccaggctgggtcaggaaaa
actttgctgatgtcttgtttaggaaaacagtgggcacatggactaggccctattccttca
tcatacctgtttgtcctgctggagtttcgtcagctcaacgtactatcccagcctctctcc
ctgtctgagctgttattccgacactgcctccatccgaaagggggcaacgaagaaaagaga
gccattgtggattacctcctttcaaatcctgagcaaagctgttgggtgctggatggctat
gatgagtttcacagcaaagtccccacacaagatgtgaagagagaacttttggacccagaa
aagcaaatgcctgttgcagacctcatctcagggctgttaaatcgtcagcttcttccagga
tgtactgtggtggtcacctgtcgtacacgtcatgccagcgatttggaaggtgtatcagat
aaagttgggcagctgctggggtgggacagctatgccatcaaggagtatgtggaaaacttc
tttcgactaaaaggtcactcagcaaacaaagctcttggggagcaggcagcagatctcctt
ctttctagtcaacacctactcgccatgtcatccctccctgccctctgcaacatctgttgc
atctgtctggagcatttgctgctagtaggcggagacccaggaaggacgcaaataactgaa
gaaagaggaggtgagacaaagagaaaagtgagaagaaaagaagaaaaagaagcacagatt
ccagaggaaggaagaggggaagatggcgatagaggagcgagttacgtacacaggggagat
caaggagtaagaagaggaggaggtgaggacataatgatggacgggacaaatggtagagcc
cagctgcctccaacacaagcccagattccctccacgctcacccaggtctacctcaccgtt
cttggtgcctttctgagccgtgatccggatagaagaggaggcaatgacgagccagtgact
atgagacttccagagagtatcacgtgcacgttgacagctctgagtcggtatcgatctgag
ttgtgtgagctcagtcagctggcctgggaaggcttagagaacagcaagatcctcttcaca
gaagaagacatctctcaggatgttttggagttttccattagaacggggcttttctcgcag
gtggacctcagacgtgaggatgggatgcttgtcagctgttactgcttcattcatctgaca
ttacaggagtttttggctgcgctcagaatcatgaccagtactgatgttagtgacgcacag
ctcaaaaaaagattcagtctgagaactcgctggatgaccaagtcagaccagaggacagtc
ttcactggatccctgcaccagtatatctgtggtctggcttccccacaatgcactgcagcc
ttagctcaactagccaggacctctggtggaacaggaggccaaagttgggtccaaaaacgg
caaactctcgttgtgaaactactgaaaaacctttgtagcaacaccctgactggaccgaag
atattagagctttgccactgtgtccaggagagccaggatacccaactagcaaagcaggtc
atggggacaagatccaccctggagctgcgcaacatccggctgttaccgaatgatattgat
gctctggcttttgtagttaactcagtaggtgacagtggcatcggattggactttggagca
tgctcaatggagatggagtgtttagatgtcctgcccaggtgtcagcacattcactacctc
agttttcgcagccgcaagtatggcgacaagtttgcagagaagttggcctccatattgcca
aaattcacaagcctaaaaaaattggagttttgtggtgccagtctgactgccacaggagcg
gctagtttggcctctgctttaccgaactgtccagacatcactgaaatcaatctgaatgac
aacaatctgaaagacacagggattaaacacatcgctgatattttctccaaacaaccaaga
ctagtctcagtaaggctgggtcgaaacaacagctctctggaagcagtggactatctcatc
aggaaaatgtcttcatgtttaaacatccagcagcttcatgcagatgggataaaggaattg
aaagtaactttctcccaaaactctgaccggaacagccataaaactaagtctgaaccaaca
atcagcttgttgaaccagaaatggagcaagcctgaaatgcaaacagttgcaaagtcattg
acacgttgccctgccttgtctgttttggatatgtctggagaccttatggatgttgaatgt
ctgaggacgctgactcagtttttgccaaagatcaccatcatcaaaaagatcattgtgaat
gacagctgctcttcagtggagggtttagtgctcctgactgctctgctctctggttgtcct
gctgtggtggagcttcatatcagactacaaagtcctgtccaggcgtccatcgtgttctct
gaagggagagaaaaacctgcacatgaaatgtctaaaatgctctgtctcagctgctgtggt
ctgctgccttctcatctggacagagtgtggaggagtctgggaacctcttctgatctgact
ttgctggatctgtcaagcaaccgtttaggaaatagaggcctgaggaaactgctggacgtc
ctgccttgtttgcgtagcatccaggaagtaaatgccagtaacaatgagattggcatggaa
ggagtggtgatgctggctggtgctttgtgctcccatcacaacttaatacaaattcacatc
agtgatggagggcgagagcaggtgatcttaaagttctgctctggcaaaaggggtgacaaa
cagcagctaaagatgttcaggataaacaacagcagccttgtgccatccgatatcagcaca
ctctgtagacgactggtccagtgtcgctcccgtgtggagttagatttgtctcacagcaca
ttgtcggacagtgccatcgaaaatctgctgaaggtcctgccgaagatgatgtcactgcag
agaatcaatgtcagccacagcatcacatccacatctggagcactgatgttggtcagatgt
ttgatgatcagtcagcgagtcacatcagtggagctcaggcctcagactgaatccttcatc
cagtttgacagcgtgaaaactgaagaagccagctgcaggttaactcattgtagcctgaac
gctgacaatgtggaggaactgctcgagatcttacagcagggtccccaactgtctgacctg
gatttatcaaataaccaactggatgatgaaggggtgaagagttttttggtttctctgcaa
aacctcaaaatcaccggctacgtaaatttgagccacaatggcctgagccagcaggggctg
ttggaagtggccggcatgctgtgcgtctgtgacagcatctccgctgtggatgtcagtttg
ggagcagaggagaggtgtctgatctggtttacacaacatgaagcttctgtaaaaacactg
agtgtcagagagagcagtttggagcgtgaccatctgatcagattagcagaaatcgtgtct
gtctgtcccaggctgaccaaactggagttcaggaacaatctgctgcagtcagattggatt
gaagactttgtgagactgttaaacagcagtcagagaggattcagtgtcagtattgaggaa
tgttggatcagatctgaagaagctgtcgggttgttgtgtcgctgtctggatctctgcagc
aacatacaaactatcaggattcaccacactacgctacacctgtttctgatgaagtccact
gaactgacctcagtcagtgatgactctgcagatgtgactccatcaatggccacagagaaa
ataggcctcgtggactgtgcagtagatgggtaccaacttgaatctatgaagaacatcatc
cttcagtgtcccttactgacagagctggatttttcccacaacagcatgggtatagaggga
gctgagtttttctatgctgtcctgccctcgctgccgaacctcacgtctctcagtattgga
tccaaagagacttgtgtgactgcgtttgagaagctctcagaggccgtactgcaggctgca
gccattcagtgcttaaatctgtcaggtcatgtgattagtgacacagccacccaaatcatg
accacagcgcttccccgtctgagatcactcaatctgtctcattgtgtgtggtcagctgct
ggaggactgaggctcgttcaaacactgcaagattgtatccgtctggaaaacctttgtctg
gactccctgcagcttaatgaggagggcacgctgtacttggcacacgcactgagaaatatc
agctccattcgcagtctcaagtaa
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