Plectropomus leopardus (leopard coralgrouper): 121950607
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Entry
121950607 CDS
T07454
Symbol
blm
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03440
Homologous recombination
plep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121950607 (blm)
03460 Fanconi anemia pathway
121950607 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plep03032
]
121950607 (blm)
03400 DNA repair and recombination proteins [BR:
plep03400
]
121950607 (blm)
Enzymes [BR:
plep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121950607 (blm)
DNA replication proteins [BR:
plep03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121950607 (blm)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
121950607 (blm)
Bloom's syndrome complex (BTR)
121950607 (blm)
FA (Fanconi anemia) pathway
121950607 (blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
DEAD
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
DUF1178
Motif
Other DBs
NCBI-GeneID:
121950607
NCBI-ProteinID:
XP_042352587
LinkDB
All DBs
Position
11:3522448..3533094
Genome browser
AA seq
1422 aa
AA seq
DB search
MSGLPLNNLKEQLARHSNAAQSKLSLAKPKPGAFSFKKKSSSGTTKVEVLTKVISSNVLA
NRNVNVPKNPLVTQSPFLNKLERPQKSQFNSFFPVSSKGTSDSISPAGNCAPAGQTPSAV
SVTKVKTASTKSDNQFTSSNGDNSTSLDTSLGFTLDDWDDFDDFETPVKAKNDSFSSEIS
GKSANPGSSFSEEKTQFAGKLNHDVSLITPELSTGFAKKKGLSTSEQSCMKTDKREHTVN
KTAASVGPSLNQDPAEFEHQDSPVRRPRRNLPAPVTSVFSDSEEDNSDVIEPLKERTDNK
KCIDPKAIQLCDNSEPEDDFDYIPPSPIPDDISYNTSTKETRSKSAGAESRESPVQSKGP
ITTLPEPSDQHSKDKINEQLFSIMESICSLVDSIPEHELIALSYGDELLLKRAQRKRILA
TGGGGLLKMQQPDSTVLSEPSFKEKTSLSCDSSNVMSCSTSLSVHSKKPPQIRRSSVISV
DNDSDHSDSIIITEPLHSKNSGTMYVKSQSTCDSPSTHSLTNPSLDLLKKTSTDLDDSDL
FFSPKKLQTVVQNKPKTPATVSAAQDIELDDFYNDYFDIDDFNDSDIPDYYDEPPNSSTV
TRTVKEGGPSKSLWEKKPSTPAPTPKPSKICSPEPTFRNPAHDRFRGFNFPHSQEMMKIF
HKRFGLHHFRFNQLEAINATILAEDTFVLMPTGGGKSLCYQLPACVSPGVTVVISPLKSL
IVDQIQKLTTLDIPATSLSGNVSETEAGRIYMQLSRKDPIIKLLYVTPEKLSLSNKLISA
LHNLYERGLLARFVIDEAHCVSQWGHDFRPDYKKLHELRQKFPNVPMMALTATATPRVQK
DILNQLNMTRPQVFTMSFNRTNLKYAVLPKKPKKVDEDCINWIKKHYPRDSGIVYCLSRN
DCDALAESLQRAKILALAYHAGLSDGDREYVQSKWINQDGCQVICATIAFGMGIDKPDVR
YVIHASLPKSVEGYYQESGRAGRDGEISHCILFYSYTDVHRIKRIISMDREGDRHTKATH
YNNLHSMVHFCENMMECRRIQLLAYFGEMKFNKSFCKEHADVSCDNCAKPNQYKMRNVSE
DVKKIVRFVQENCEKVGAKFGRTAQQNRLTLNMLVDIFVGSKSAKIQTGMFGMGGAYSRH
NADRLFKKLVLDNVLVEDLYITNNGQAVAYVSAGPKAMNVLSGHMQVEFYETESASSIRK
HKSAVAKNVSQREEKVQQCLNELTDLCKQLGKAFGLHYYNIFSTATLKKISEKLSSDPEV
LLQIDGVTEDKLEKYGAEVIQVLQKYSEWQLPEEQQTDNGGDGWIDTAQGRTYGDSDDDT
ESSTYFSKQATQGQKRKKAPFFKYAKKKKAYGNTSSNSKGRGYSSNKSFSSYSYRGGSKA
AGRGSRSSAGDASTGRTPGILTTPTPQTSDRPFLKPTFSYLD
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcttccactaaataacttgaaggagcagctggcgaggcacagcaatgctgct
cagagcaagctgtctctggctaaacctaaaccgggggccttttctttcaaaaagaagtcc
tcatcaggtacaactaaggtggaagtcctgaccaaggtaatctcctctaatgttttggca
aacaggaatgtcaatgtccctaagaaccctttggtgactcagtctccttttttaaacaag
cttgagagacctcaaaaatcccaattcaacagcttcttccctgtaagttcaaaaggcaca
tcggactccatcagcccagcaggtaactgtgctcctgcaggccagactccttcagcagtg
tccgttactaaggtgaaaacagcttcaactaaatctgacaatcagttcactagtagcaat
ggagacaactccacaagtctggatacatctctgggattcacattagacgactgggatgat
tttgatgactttgaaactcctgtcaaagcaaaaaatgactcattcagttcagaaatatct
gggaagagtgccaatccaggatcatcttttagtgaagaaaaaacacagttcgcagggaaa
ttaaaccatgatgtctctcttataacaccggagttgagcactggttttgcaaagaagaag
ggcctttccacaagtgaacagtcttgtatgaagacagataaacgtgagcacacagtcaac
aaaactgcagcttctgtaggacctagtttaaatcaggacccagcagagtttgaacaccag
gattctcctgttagaaggcccagaagaaatcttcctgctcctgtaacctctgtcttcagt
gacagtgaagaggacaacagtgatgtgattgagcctctaaaagaaaggacagataataaa
aaatgtattgacccaaaggcaatacagctttgtgacaattcagagcctgaagatgatttt
gattacattcccccttctccgatccctgatgacatctcttacaacacttctacaaaggag
accagatctaaatcagctggtgctgaaagccgagaaagtcctgtgcaatcaaagggaccc
atcacgacactacccgaaccctctgatcaacactcaaaggacaaaataaatgagcaactc
ttcagtatcatggagtcaatttgttctctggttgattccatccctgaacatgaactaata
gctctgtcatatggagatgagcttttgctgaagagggctcaacggaagaggattcttgca
acaggtggtggcggtttactaaagatgcagcagccagacagcactgtgctttctgaaccc
agctttaaagaaaagacttctctcagctgtgattcatcaaatgttatgtcatgtagcacc
tctttgtctgtgcactccaaaaagcctcctcagatcaggcgatcttcagtcatctctgtg
gacaatgactctgatcactctgacagtattattatcacagagcctttgcacagtaaaaac
agtgggaccatgtatgtaaagagtcagagcacctgtgactctccatcaacccacagcctc
acaaatccatcccttgatttgttgaagaaaacgagtacagacctggatgattcagatctc
ttcttctctcccaaaaagctgcagactgttgttcagaacaaacctaaaaccccagcaact
gtttcagcagcacaagacatagaactagatgacttttacaatgactactttgacatagat
gacttcaatgactcagatatccctgattactatgacgaacccccaaactccagcaccgtg
actagaacagtgaaagaggggggaccaagtaagtctttgtgggagaagaaaccatcaaca
cctgctcccacacccaagccgtcaaagatctgctcacctgagcccactttcagaaacccg
gcccatgatcgcttcagagggttcaatttcccccactcacaggagatgatgaagatcttt
cacaagcgttttggtcttcatcatttcaggttcaatcaactggaagcaattaatgcaaca
attctggcggaggacactttcgttttgatgcccacaggtggaggtaaaagcttgtgctat
cagctgcctgcctgcgtgtcaccgggagtcactgtggtcatttctcccctcaaatcactc
attgtagaccagatccagaaactcactacactagatatcccagcaacaagcctgtctggt
aatgtaagtgagacagaagcaggcaggatttatatgcagctctccaggaaagaccccatc
attaaacttctctatgtcactcctgaaaaattgagtttaagtaacaagctgatctctgcc
ctgcacaacctgtatgagcgaggccttttggcgcgtttcgtcatagatgaggcccattgt
gtcagtcagtggggtcacgatttccgcccagactacaagaagttgcatgaactgcgtcag
aagttccccaacgtgccgatgatggccctgacagccaccgccaccccgcgtgttcagaaa
gacatcctgaaccagctgaatatgactcggccgcaggtgttcaccatgagcttcaacaga
acaaacctgaagtacgctgtcctgcccaagaaacccaaaaaggttgacgaggactgcatt
aactggatcaagaagcactacccacgtgactctggcatcgtgtactgcctgtcccgtaac
gactgtgatgccttggctgagagtctgcagagagcaaagatattggcgctggcgtatcac
gcaggactgagtgacggtgacagagaatacgtgcagagcaagtggatcaaccaggatggc
tgccaggtcatctgtgccaccatagcctttggcatgggcatcgataagcctgatgtgcgc
tatgtgatccatgccagtctgcctaagtcagtggagggttactaccaggagtctgggaga
gctggcagagatggagagatctctcactgtattcttttctactcctacacagacgttcac
cgcatcaagaggattatcagcatggacagagaaggtgacagacacaccaaggctactcat
tacaacaacctccacagcatggtgcacttctgtgagaacatgatggagtgcagaagaatt
cagctgctcgcttactttggagagatgaagttcaacaaaagcttctgtaaggagcacgca
gacgtcagctgtgacaattgcgccaaacccaaccaatacaagatgagaaatgtcagtgaa
gacgtgaagaagattgtgaggtttgtccaggagaattgtgagaaagtcggagcaaagttt
ggcaggaccgctcagcaaaaccgactgacattgaatatgctagtggacatctttgtaggc
tctaaatctgccaagatacagacagggatgtttgggatgggaggagcctactcgcggcat
aatgctgaccgtctcttcaaaaagctggtgctggacaacgtcctggtggaggacctctac
atcacaaacaacggccaagctgtggcgtatgtctctgctggacccaaagccatgaatgtg
ctatctggacacatgcaggtggagttctatgagacagagagtgcatccagcatcaggaaa
cataaatctgctgtggccaagaacgtctcccagagagaggagaaggttcagcagtgtctg
aacgagctgacggatctgtgcaagcagctggggaaagcgtttggccttcactattacaac
atcttctccactgccaccttgaaaaagatatctgaaaagctttcttctgaccccgaagtc
ctcttacaaatcgatggtgtgacagaagacaaactggagaagtacggagctgaagtcatt
caggtcctacagaaatactctgagtggcagctgcctgaggaacaacagactgacaacggt
ggagacgggtggatcgacacagcacaaggccgcacatatggagactctgatgatgacaca
gagtcctccacgtacttcagtaagcaggctacacagggacagaagagaaagaaagctcca
ttcttcaaatatgccaagaagaaaaaagcatacggcaacacaagttccaactctaaagga
cgtggctatagcagcaataaatcgttctcatcgtacagctatagaggtggatcaaaagct
gcaggccgggggtcaaggagctcagcaggagatgcatcaacaggcaggacaccaggcatc
ctgaccaccccaacccctcaaaccagtgacagacccttcctaaaaccaaccttttcatac
ttggactaa
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