Plectropomus leopardus (leopard coralgrouper): 121950737
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Entry
121950737 CDS
T07454
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121950737 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121950737 (cnot1)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121950737 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121950737 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
121950737
NCBI-ProteinID:
XP_042352760
LinkDB
All DBs
Position
11:31437519..31467560
Genome browser
AA seq
2388 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFIATLCYAIDNPLHYQKSLKPSAHLFTQLSKVLK
LSKVQEVIFGLALLNSSNADLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LQLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTMMESSLAEFMQEVGYGFCASLDECRNIIIQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDGSQAHTWNVEVLIDVVKEVNPNLNFKEVTYE
LDHPGFIIRDSKGLHIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVFS
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQMDTLSGMGSL
NLGGTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLSSQLPGMD
SGPLGTGIGSGIGSSLGMSTVNTDPFGTRKMSTPGLNPPTFQQTDLSQVWPEANQHFSKE
IDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFP
QYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYYFGIAALDRFKN
RLKDYPQYCQHLASIAHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLALAQV
QAQSQQPGVPKAPQPGQPSTLVTTTTTTTTVAKTPTITRPTPSSFKKDVPPSINTTNIDT
LLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMK
RVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGH
WLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFRPQNP
WTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGSLLKDKEKLKSLEEQLS
APKKEAKPPEEMLPVSTTGDFVPFAAPPSTPAATTTTCTTTGPPTPQFSYHDINVYALAG
LAPHININVNIPLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQIIRKDFA
LDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQREMME
EAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQ
AERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWATDDV
AQIYDKCMADLEQHLHAIPPALAMNPLTQALRSLLEAVALARNSRDGIAALGLLQKAVEG
LLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVEAV
ELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVTEADLFHTI
ETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGL
REKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVE
ISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLG
IVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRP
TKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPM
QILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTP
NLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGN
RYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLN
AIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIE
LIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acaaagaaaaactaccgagccagccagcaagaaatacagcatattgtaaatcgtcacggt
cctgaggcagacaggcatctactacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaggactttcaccagacacagtttctgatccaggagtgtgtgtcg
ctgatatcaaagccaaactttatcgctactctgtgttacgccattgacaatcccctacac
taccagaagagtttgaagccatcggcacacttgttcactcaactgagtaaagttcttaag
ctcagcaaagtccaagaggtaatatttggacttgctttgctaaactccagcaacgcagac
cttcgtggttttgctgcgcagttcatcaaacagaaacttccggacctcctgcggtcatac
gttgacgcggatctcggaggaaaccaggaaggtggcttccaagacattgctatagaggtc
ttgcagctactgctctcccatctactctttggccagaagggagccagcggagtagggcaa
gagcagattgacgccttcctcaaaacactttgccgagatttcccccaggagcgctgccct
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctcatggacagaatcctg
ccagactcgggggagttagctaagaccatgatggagagctctcttgcagaattcatgcaa
gaagttggctatggcttctgtgctagtctggatgagtgcagaaacattatcatccagtat
ggggtgagagaggtgactgccagccaggtagccagggtccttggcatgatggctcgtacc
cactctggcctaactgatggcatcccattacagtccatctcagctccaggaagtggtatc
tggagcgatggtaaggacaagaacgacggctcgcaggcacacacgtggaatgttgaggtt
ctcatcgacgttgtcaaagaagtgaatcccaacctgaacttcaaagaggtgacatacgaa
ctggaccacccaggatttataatccgggacagtaaaggcctgcatatcgtggtgtatggc
attcagagggggttgggcatggaggtcttccctgtcgatctcatctatcggccatggaaa
cacgcagagggacagctgtcattcattcagcactccctgatgagcccagaggtgttttcc
tttgctgactacccgtgccacacggtggccattgacatccttaaagccccaccagaggat
gacaacagggagatcgccacctggaaaagcctggacctggtggagagcctgctcaggctg
tctgaggttggccagtatgagcaggtgaagcagttgttcagcttcccaatcaagcactgc
cctgacatgttggtgctggcattgctgcagatctccacctcctggcacacactgcgccat
gagctcatctctaccctaatgcccatctttctgggcaaccaccctaactctgccatcatc
ctgcactatgcctggcacggacagggacagtctccctccatccgtcagctaataatgcat
tcgatggctgagtggtacatgagaggggagcagtatgaccaggccaagctatcccgcatc
ctggatgtggcccaggacttgaagtctctatcgatgttgctgaatggtactccctttgcc
tttgttattgaccttgctgcacttgcctctcgccgtgaatacctcaaacttgataaatgg
ctgactgacaaaatcagagagcatggtgaaccttttatccaggcctgtgtgacattcctg
aagaggcgctgcccatccattatggggggtctggccccagacaaggaccagcccaaaagc
gcccagctgcccccagagaccttagccaccatgctggcctgcctgcagtcctgtgcaggg
agtgtgtcccaggagttgtcagagacgatcctgaccatggttgcaaactgcagcaatgta
atgaataaagcccggcagccaccaccaggggtaatgccaaagggccgtgcccccagcacc
agcagcctggatgccatctctcctgtacagatggacactctgtctggcatgggttccttg
aacctggggggcacagccacctcccatacccaaagcatgcagggtttcccaacctcactc
agttctgctttcagtaacccccagtccccagcaaaagccttcccaccactctccaacccc
aaccccagcacaccatttgggggcattggcagcctgtcctcgcagctccctggtatggac
tctggtcccttgggcacaggcatcggctccggtatcggctccagtctggggatgtcaact
gtaaacacagatccttttggcaccagaaagatgagcacaccaggcctgaacccaccgacc
tttcagcagactgacctttctcaggtgtggcccgaggcaaaccagcactttagtaaagag
atagacgacgaagccaacagttatttccagcgcatctacaaccacccacctcacccaact
atgtctgtagatgaagttctggaaatgctgcagaggttcaaggattcaaccatcaagcgg
gagcgagaggttttcaactgcatgcttcggaacttgtttgaggaatacagattcttcccc
cagtacccggacaaggagctgcacatcactgcctgcctttttggtggcattattgagaag
ggtcttgtcacctacatggccctgggcttggccctacgatatgttcttgaagccttaaga
aaaccctacggatccaaaatgtattactttggaattgcagccctagataggtttaaaaac
agactaaaggactatcctcaatattgtcaacatctggcttcaattgctcacttcttgcaa
ttcccccaccatttacaagagtgcgtgcagtatatcgagtatggccaacagtcacgggac
cctccggtgaagatgcaaggctccatcaccaccccgggcagtctggcactggcacaagtc
caagctcagtcacagcaacctggcgtccccaaagccccgcagccgggtcagcccagcact
ctggtcactaccacgacgactacaaccacagtagcgaagacccctaccatcacaagacca
acacccagcagcttcaagaaggatgtgcctccctccataaacacaaccaacatcgacacc
ctgctagtggccactgaccaaacagaaaggattgtagagcctccagaaaatgtccaggag
aagattgcttttatcttcaacaacctgtctcagtccaacatgacccagaaggttgaggag
ttgaaagagacggtgaaggaggagttcatgccctgggtttctcagtacctggtgatgaag
cgcgtcagcattgagcccaacttccacagtctctactccaactttctggacactctcaag
aaccccgagtttgtgaagatggtcctcaatgagacctacagaaatatcaaggttctgttg
acctctgacaaggcagctgccaatttctctgatcgctccctgctgaagaacttgggccac
tggttgggcatgattacactggccaaaaacaagcctatcctttacacagatctggaagtc
aagtctctgctgctggaggcctatgtgaaaggccagcaggagctactgtatgtggttcct
ttcgtggcaaaagttttggaatctagtctacgaagcatggttttcaggccccagaacccc
tggaccatggccatcatgaatgttctcgctgagttgcatcaagaacatgatctcaaactg
aacttgaagtttgagattgaagttctgtgtaagaacttgtctttggacatcaatgacctc
aagccaggaagcttactgaaggacaaagagaagctaaagagcctggaggagcagctgtct
gcaccaaagaaagaggcaaagcctccggaggagatgctgccagtttctaccacaggagac
tttgttccatttgcagcccctccctcaaccccagctgccaccaccactacttgcacaacc
accgggccccccaccccacagttcagttaccacgacatcaatgtgtatgctctggcaggc
ctggcaccacacatcaacatcaatgtcaacatccctctgctgcaggcccatcctcagttg
aaacagtgtgtacggcagtcagtagagcgagccgttcaggagctggtacacccagtggtt
gaccgctctatcaaaatagccatgacaacctgtgagcagatcatcaggaaggactttgcc
ctggattcggaggagtcccgcatgcgtgtggctgcccaccatatgatgagaaacctgact
gctggtatggccatgatcacctgccgcgagcccctgctgatgagcatcgccaccaacctt
aagaacagctttgctgctgcactgagggcaccaaccccccagcagagggaaatgatggag
gaggctgcagccaggattgctcaagacaactgtgaattggcttgctgcttcattcagaaa
acagccgtggagaaggctggacctgaaatggacaagagactagctacggagtttgagctg
aggaagcatgcacgccaagagggacgtcgttactgtgatcctgttgttctgacttaccag
gctgaacgtatgcctgagcagatcagactcaaggtgggaggagtggacccgaagcaactg
gctgtatatgaggagtttgccaggaacgttccaggtttcttacccagtaatgatctctca
caacccactggcttcttggctcagcccatgaagcaacaggcatgggccacagatgacgtg
gctcagatctatgataagtgcatggcagacttggagcaacatcttcatgccatccctcca
gccctcgccatgaaccccttgacccaggctctgcgcagcctgctggaagctgtggccttg
gctaggaactccagggacggcattgctgcacttggtctcctgcagaaggctgtggaaggt
cttctggatgctactagtggcgctgatgccgacttgctgctacgttacagggagtgtcac
ctgctggtgctaaaagccctgcaggatggacgtgcctatggaccacagtggtgcaataaa
cagatcaccaggtgtctgattgaatgccgtgatgagtacaaatataacgtagaggcagtg
gagcttctgatcaggaaccatcttgtgaacatgcagcagtatgatctgcacctggcacag
tcaatggaaaatggactgcactacatggcagttgcatttgctatgcagttggtgaagctc
ctgctggtggatgaacgcagcgtcagccatgtcacggaggcagacctcttccacacaatt
gagactttaatgaggacctgtgcacactcccgagccaacgcacctgaagggctcccccag
ctgatggatgttgttcgctccaactatgaggccatgattgaccgggctcatggaggaccc
aacttcatgatgcactctgggatttcacaggcttcagaatacgatgatcctccaggcctg
agggagaaggcagagtacctcctgagagaatgggtcaacctgtaccactcagctgctgct
ggcagggatagcaccaaagctttctctgcctttgttggccagatgcaccagcagggcatc
ctgaagacggatgacttgatcacaaggttcttccggctgtgcacagaaatgtgcgtggag
ataagctatcgggcacaggctgagcagcagcacaacccagcagccagtgcagccatcatc
agggccaagtgttaccacaacctggatgcctttgttaggctcattgccctgctggtcaaa
cactctggagaggccaccaacacggtgacaaaaatcaacctcctcaacaaggtgctgggt
atcgtagtcggggtgctgatccaggaccatgatgttcgtcagacagaattccaacagcta
ccataccaccgcattttcatcatgctgctgttggagctcaacgctcctgaacatgtccta
gagaccatcaacttccagacactcaccgccttctgcaataccttccacatcttgagaccc
accaaagcacctggctttgtttacgcctggctggaactcatctctcatcgcatcttcatc
gccaggatgctggcacacacaccgcagcagaagggttggcccatgtatgcacagctgctg
attgatctcttcaagtacctggcgccattcctgaggaatgtagagctcaacaaacctatg
caaatcctctacaagggcacactgcgagtgctcctggtcctgctgcatgacttcccagag
ttcctgtgtgactaccattatggcttctgtgatgttatcccaccaaactgcatccagctc
cgcaacctcatcctcagtgcctttccacgcaacatgaggctccctgaccctttcacaccc
aatctcaaggtggacatgctgagcgagatcaacatcgcgccccgtatcctcaccaacttc
actggcgtcatgccttcccagttcaagaaggatctggactcatatctgaagactcgttca
ccagtcaccttcttgtctgagctgcgcagcaacctgcaggtgtccaatgagccaggaaac
cgctacaacatccagctgatcaatgctctagtgttgtatgtaggcacacaggcaatcgct
cacatccacaacaagggcagcaccccctccatgagcactatcacccactctgcacacatg
gacatcttccagaacctggccgtggacctggacactgaggggcgttacctgtttttgaac
gcgatcgccaatcagctgcgctaccccaacagccacactcactacttcagctgcaccatg
ctctatctgtttgctgaggccaacacggaggccatccaggagcagatcaccagggttttg
ttggagaggctgatagtgaacaggcctcacccgtggggtctcctcatcaccttcatcgag
ctgatcaagaatcccgccttcaagttctggagccacgactttgtgcactgtgcccctgag
attgaaaagctgttccagtcagtagcccagtgctgcatggggcagaaacaggcccagcag
gtgatggagggcaccggtgccagctag
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integrated database retrieval system
