Plectropomus leopardus (leopard coralgrouper): 121950785
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Entry
121950785 CDS
T07454
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plep03036
]
121950785 (tdrd12)
Enzymes [BR:
plep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
121950785 (tdrd12)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121950785 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
CS
Motif
Other DBs
NCBI-GeneID:
121950785
NCBI-ProteinID:
XP_042352829
LinkDB
All DBs
Position
11:complement(34488816..34523071)
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AA seq
1530 aa
AA seq
DB search
MPKITILKVESPSSLWGRVIQDPSCDAETTNQYDSLLAQMNLFYHDVTQDLRKLKPPSLE
EGQVCVVYWSVIKSWCRALVESIIMDSMSCHARCFLVDHGERLIVPSDQIRVAVQTFLRL
PFWVRKFHLAGIKPKTLRVSFLEEKAQLVPSTKWDSSATLYLHSLLQASTLAEAVLLESE
SDSTSVKLYLTVRNIKICVNDDLVAKKFAYYSRDLADSDVLDEMDKYPVMLPSSILTQTV
CKTSNQRTAQTQAPPGKHTGVTSSGAGDWLATLMSQQSRQHELQTCEEGSGSKVTDKQLS
PGCRSQNGSDAAAESDSTEDTDSSLAAALTKNLSLFRFLKFLNPASSLQQAAPSVGQHKE
LKDCRPEETTAASGSGSGQEMSAANTASAVHEPGTPHRQTLFGMSRESGAEGLCESAQAE
YLAEEETSSSSRSVESGPAEKTWRTEEDWACSRFLEWLNPQPLNPDPDAADDTVVPRDPR
SSGILVHSAFPVEPCSSLDDAPLTDSLRWVLRRKQYSSLSPADCYSWPAVARGCNTAIVS
QHANQPLSYLGPLLTHILLNSIHISVSSTGPVAVLLCPGWEKVQAVYDLLEEMKVTSVLH
PISVLLGIGKDEAKAVRIPKNCLLLVTTPFSLVRLLSCHCFLFLRLYHLVLDEADQLFTL
APDQMATILQHFQKVTSSEENAYCPQQLIAVAKRWTSHMEGLLANHMPYPCVVMSSPGEA
ALYGNVQQIILMTLESSKVSELLGALDFNPGVGQKTLIIANSAGDVEDVFKAVTTKSAFC
LKTHEGLTHLFDFVVQQWGKDIGPGTHVILVTTTECLKCLGIRDATCVVHYGFPTSPRVF
GERLFGMVENFRNLSERVSSQDQTGSSVLTRSVLLISERNACHVVRVLRYLERTNASLPS
ELLSFAHGVHVAQEDQKTDKPLCSYLKSFGVCRDSGVCPDRHRFVSQLDHSELPASGVIE
VVPLCIKTASVFYGRIVKKEDGGFQNMASEMNSYYADKKPGAEEVLEGGLYAVQEDDAFH
RVKILSVPDRGDCLFFSVFVGFIDVGKEEEVKSHQLLQLPPQFHSLPGQAVQIVVCQVKP
VDADTDWHPKVTRAISQKIRGLQHRARAVFSLGNTVFVDPMVRVTKVPGMKTVINEYSVQ
AEILNSGMGVRNPEHLDLLRALCRESGEGAGIGSRSGDGPASLQVKAEAVREAEVTRLAD
LPELEPCEPLSPEPAVIQSLVPAAPVPPAAQISPIPAFDQNQRNSHTADLRSAEEMMRIR
DEELLPSTSRPAPLTPAENGVSAGDDQSISRQVIGADEMNCDDSTKSFHPPVRWYQTPDA
VTVTLKLMNPERQRCDFYPDRVVYSGRANSRTYRADLQLHADVAADRCRWEMKSNEPVLK
LVKQQQGHWERLLRNKNIFVSYDMEHIEEDEDRTPNGLLLLWEPFNLPLNSAVAAGARLA
VPIYYDQGRVQDLRTVGAQTSGGTRKNRQSLGPVGFKGGEMLISPLRALNKDGSIHRICV
NWRRRRGGGLGSLLGGDHTGNTNRSSGKTD
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaataacgattttgaaggtcgagagcccgtccagcctctggggtcgggtcatt
caggatcccagctgtgacgccgagaccacaaaccagtacgacagtctgctggctcagatg
aaccttttctaccatgacgtcactcaggacctgcgcaagctgaagccgccatcgttagag
gagggacaggtgtgtgtggtgtactggtcagtgataaagtcgtggtgtcgggcgttggtg
gagtcgatcatcatggactccatgtcctgtcatgctcgctgcttcctggttgaccacgga
gagcgactcatcgtcccgtcagaccagatccgcgtcgctgtgcagaccttcctccggctc
ccgttctgggtgagaaagttccacctggcgggaatcaaaccgaaaaccctgcgagtgtct
ttccttgaggagaaggcgcagctcgttccgtccactaagtgggacagctctgctaccctc
tacctgcacagcctgctgcaagcgtcgactctggctgaggccgtgttgcttgagtcagag
tcagactccacctctgttaagctctacctgacggtacgaaacatcaagatctgtgtcaac
gacgatctggtggccaagaagtttgcgtattacagcagagatttagctgacagcgacgtg
ctggatgagatggacaaataccccgtcatgctgccctccagcatcttaacgcagactgtc
tgcaagacctcaaaccagcggacagcacaaacccaagcacctccgggtaaacacacgggc
gtcacttcctccggagcaggtgattggctggcgactctcatgtcacagcagagccgacag
cacgagctgcagacctgtgaagaaggcagcgggtcaaaggtcacagacaaacaactgtcc
ccaggctgccgctcgcagaacggctcagacgctgctgcagaaagtgactcgacggaggac
actgactcgtctctggctgcagctctgactaaaaacctcagtctgttcaggttcctaaag
tttctgaatcctgccagcagcctccagcaggcggcgccctctgtcggtcagcataaagag
ctaaaagactgtcgacctgaagagacgactgcagcctccggctccggctcaggacaggaa
atgagcgctgccaacacagcttcagccgttcatgagccgggaacaccacacaggcaaaca
ttgtttggtatgagcagagaaagtggagctgaaggtctctgtgagagcgctcaggctgaa
tatctggcagaggaagaaacgagcagttcgagtcgatcagtggagtcaggaccggcggag
aagacgtggaggactgaagaggactgggcctgttcacgctttttggagtggttgaacccg
cagcctctgaaccccgatccagacgccgcagacgacacggtcgttcccagagatcccagg
agcagcgggattctggtgcactctgccttcccagttgagccctgcagcagcctggatgac
gccccccttacggactctcttcgctgggtgttgcggaggaagcagtacagctctctgtct
ccggctgactgttacagctggccagccgtggctcgaggatgcaacaccgccatcgtctcc
caacacgccaaccagccgctcagctacctcggcccgctcctcacacacatcctgctcaac
tccatccacatctccgtctccagcacagggcccgtagcggtgctgctgtgtccgggctgg
gagaaggtccaggccgtgtacgacctgctggaggagatgaaggtcacctcagtcctgcac
cccatcagtgtgttgctgggtatcggcaaagatgaggccaaggctgtcaggatccccaaa
aactgcctgctgttagtgaccacgcccttcagtttggtccgtctgctgtcctgccactgc
ttcctgttcctgcgtctgtaccacctcgtcctggacgaggccgaccagctctttactctg
gctcctgatcagatggcgaccatcttgcagcacttccagaaggtgacgtccagcgaggag
aatgcgtattgtcctcagcagctcatcgctgtggcaaaaagatggaccagtcacatggag
ggtttattggccaatcacatgccatacccctgcgtcgtcatgagcagccctggggaggct
gctctgtacgggaacgttcagcagatcatcctcatgactctggagagcagtaaggtctca
gagctgttgggtgcgttggatttcaaccccggtgtcggccagaagactctgatcatagct
aattctgctggggacgttgaagacgtgttcaaggctgtgaccaccaaatcagcattctgc
ctcaagacccacgaggggttaacacacctgtttgactttgtcgtccagcagtgggggaag
gacatcggccccggcactcacgttattctggtgaccaccaccgagtgtctcaagtgtctg
ggaatcagagacgccacttgtgtcgtccactacggcttccccacttcccccagagtgttt
ggcgagcgactcttcggcatggtggagaacttcagaaacctctctgaacgagtttcctcc
caggatcagacggggagctctgttctcacccgctcggtgctgctgatctctgagaggaac
gcctgtcacgtggtcagggttctgcgttacctggagcgaaccaacgcctcgctgccctcc
gagctgctgtccttcgcccacggcgtccacgtggcccaagaggaccagaagaccgataag
cctctctgcagctacctcaagagcttcggagtctgccgagacagcggtgtgtgtcccgac
cgtcacagattcgtttcccagctggatcattcggagcttcccgcctcaggagtcatagag
gttgtgcctctctgcattaagacggcgtcagtgttctacggtcggattgtcaagaaggag
gacggaggttttcagaacatggcgtctgagatgaactcttactatgcagacaagaaaccc
ggagccgaggaggtgctggagggaggcctgtacgccgtgcaggaggacgacgccttccac
agggtgaagatcctgtccgtcccagaccgaggcgactgtctgtttttcagcgtctttgtt
gggttcattgatgtgggaaaggaggaggaggtcaaatcccatcagctgctgcagctcccg
ccgcagttccactctctgcccggccaggccgtgcagatcgtcgtctgtcaggtcaaacct
gtcgacgccgacaccgactggcaccccaaggtcaccagagcgatcagccagaagatccga
ggtctgcagcaccgagcaagagccgtttttagtctgggaaacactgtttttgttgatccc
atggtgcgtgtgacgaaggtgccaggaatgaaaactgtcatcaatgagtacagcgtgcag
gcggagatcctgaactctgggatgggagtccgcaacccggagcacctggacctgctgagg
gcgctctgccgggagagcggcgagggggccggtatcggctccaggtcgggagacgggccg
gcgtctctgcaggtcaaagctgaagccgtcagagaggcggaggtcacccggctcgctgac
cttcctgaactcgaaccgtgtgagccgctcagtccagaacctgcagtgatccagtctctg
gtcccagcagcaccagtaccaccagcagcccagatctccccgattccagcgtttgatcag
aaccagagaaacagccacaccgctgatctcaggtcagccgaggagatgatgaggatcaga
gatgaagaacttctcccctcgaccagccggcctgctcctctgacgcccgctgagaacggt
gtgtctgcaggtgacgatcaaagcatcagccgacaggtcatcggcgctgatgagatgaat
tgtgacgactccactaaaagtttccatcctccggtgcgttggtaccagacgcccgacgcg
gtgacggtgacgctgaagctgatgaaccccgagaggcagcgctgtgatttctaccccgac
agagtcgtctacagtggccgagcaaacagccgcacctacagagccgacctgcagctccac
gccgacgtcgctgctgaccgctgccgctgggagatgaagtccaacgagcccgtcctcaaa
ctggtcaaacagcagcagggacactgggagagactcctcaggaacaagaatatttttgtg
agttacgacatggagcacattgaagaggatgaagacagaacgccgaacggcctgctgctg
ctgtgggaacctttcaacctgccccttaactcggctgtagcagccggcgcccgtttggcg
gtccccatctactacgaccaaggccgtgtccaggatttgaggacagtgggggcccagacc
tctggaggaacaagaaaaaatcgccaatcactgggccctgtgggtttcaaaggcggcgag
atgctcatttctcctctcagagcgctgaataaagacgggagcattcacaggatctgtgtg
aactggcggcggcggcgcggtggcggcctcggctctctgctcggaggtgaccacaccggc
aacacaaacagaagctcagggaaaacagattga
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