Plectropomus leopardus (leopard coralgrouper): 121950884
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Entry
121950884 CDS
T07454
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03013
Nucleocytoplasmic transport
plep03015
mRNA surveillance pathway
plep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121950884 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
121950884 (acin1a)
03015 mRNA surveillance pathway
121950884 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121950884 (acin1a)
03041 Spliceosome [BR:
plep03041
]
121950884 (acin1a)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121950884 (acin1a)
Spliceosome [BR:
plep03041
]
Complex C
Other components
EJC/TREX
121950884 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
121950884
NCBI-ProteinID:
XP_042352904
LinkDB
All DBs
Position
12:complement(26219332..26237659)
Genome browser
AA seq
1810 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTAH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYDTNEEEDHTEVNNSTSCP
PQAQDATAALAEQHKPPGPSGGEGFFGAVNEGEGNRSQDADMSGPPASGSVAMRIPGSQH
RPERGSVSNEVAADSDDDDSEDAEEDGDDDDWENGARRRSHREPARMPTARERSGASCQP
PQQHMPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPARRSPSTSSSGSSSS
GSRSSSPEPQRSGHAERKPGPLTLLARKMESEGAFSGAGWHHSGGEGDRQESSSPATSFP
GRGPPEGLVSAITHTANTAGHVSFPMIPGANQGVTGTHSAHLQVPVSVLKATATEERDRE
RDSEIEREKALELERQEKQRKLEQERAMEEERKRALALERERALEKERIERQQALEREER
EKALQRERELALERERQERELALAKEREEREQALARERALELERQKELERQRALEQERLQ
REKEERERREREEMERVMELERAKALEQERKERERALEQERLERERALEAERMEKERIER
EKALEQERLERERLEREKALEQERLERERALEQERLEQERLEREKALEQERLERERALEQ
ERLEREKALEQERLEREKALEQERLEREKALEQERLEREKVLEQERLEREKALEQERLER
ERALEKERLERERALEKERLEQERLEREKALEQERLERDRIEREKALEQERLERERALEQ
ERLERERALEQQRLELERKEKERIEREKALEQERIEREEALEREKEEKERLEREAALEQQ
RKEKERAEKERKERLEREKALEQEKLERERALEKESALKLERLEKEKAVQKEKEEQERAL
EQEKERARVAEKERESHLPPSKRGREIGLTPLPTPPPLSTGPGGNSSTEAGEQEGVHAPM
SQGEGAESGAPMSSTPLSPQSSFKKFRFFRDSPVQTQSSNTSIVIKRPRNFSDTPQPRSS
PVSSLSEVGQQQQEGLKSSAEHQDPQMQTKQEDVARALGSLGAQLEKETTLSTTPSPKKG
GAMCLVLEDKEKDLVKMEQAANESTKKSEVDESKAPSSPVDAVQQRGRDEKKDEKQKRRS
SSNDSSSSESDSGSSSSGSSGSSSSSREKTSSTSRGRREEKPSPKPRVTLEAQAEDLKET
QKALPCKRDMSAEKSNATVDGDSHTKIPFNEAPTREETKRQREDSEEEEETDKQSQVKET
AMAESEKLPETGEETPKAFSARKISISSTGSAEGEQDSGATAGRKRRWGSSTAVTAKKPS
ISITTDSLKSLIPDIRPCLGQEAVVDLHPEEAVLSGAEDEERERSDQDLQIRRTVTQVVH
SESQENGQKEAKRSRHEEVEEDDQQGDRERTGAHEEKMDTSFPGAIETQSPSHTSHDVEI
NTVTPSDTLIRRSISQQKTGVSITIDDPVRTARQPSPPRGKVSNIVHICNLVRPFTLGQL
KELLSRTGTLVEEGFWIDKIKSHCYVTYCSSEEAVATRAALHGVKWPQSNPKVLSVDFCQ
QDELDFHKGLGAADRPGAEDQGPGSGRGRTSGLPSLLPERDQWAEREREMERRERARAER
EWDRDKVREFGKPGEEKEGGPRRSRSRERRRKERGKSKEKKTEKKEKTAEDPPAKLLDDL
FLKTKAAPCIYWLPLTEEQFVQREAARAERMKEREKRRKELDEEEEKKKEEERKERMKAG
SGPTGERSEGEKERERDRERDRDRDRGRDRDRERERENDKRRDGYRRPEGRGAGGGRRSR
SRSDPRERRR
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggagaccgctccagtcccttcgagtagcg
gatttgaaagctgctcttgaggagagaggactctcgaaaagcggccagaagaatgctctc
atcaaaagacttaagggggctctcatgctggagaatctgcagaggacctccactgctcac
atcggactgcagccaaactcgcagattggcgaagaaatgagccagaacagctttatcaag
cagtatctggctaaacaacaggagctcctgaggcagcggctggagagggaggctcgtgaa
gcatatgacacaaacgaggaagaggaccacacagaagttaacaacagtacctcatgccct
cctcaagcccaggatgccacagcagcattggctgagcagcacaaaccacctggaccctct
ggtggggagggattctttggtgcagtgaacgagggagagggtaacaggagccaagatgcc
gacatgtccggtcctcctgcttctggctctgtcgccatgcgcattcctggtagtcaacac
cggccagagagggggtctgtctccaacgaagttgctgctgacagtgacgatgacgacagt
gaggatgccgaggaggatggtgacgacgatgattgggaaaacggtgctcggaggagaagc
cacagagagccagcccgaatgcccacggccagagagaggtctggagcgtcctgtcaaccc
ccacagcaacacatgccttcccttttgtcccctcaactccgccagcccacacctcctcca
tccccacctccagagttatcattccctttgcctgacacccctaaacagagcccccctagt
ccagatgtagccccagctaggcgctcacccagtacctccagctctggttcctccagcagt
ggcagccgtagtagcagcccagagccacagaggagtggacatgcagagcgcaagccgggc
ccgttgacccttctggcacgtaaaatggagtcagaaggtgctttctctggagcaggttgg
caccacagcggtggggaaggtgatagacaggaaagcagttctccggctacatcatttcct
ggcagagggcctccagagggtctggtatctgccatcactcacacagctaatacagcaggc
catgtctcatttcccatgattccaggcgccaaccagggtgtcacaggaacacattcggcc
catttacaagtacctgtgagtgtgctcaaggccactgcaacagaagagagggacagagag
agggactctgagatagaaagagaaaaggcccttgagctggaaaggcaagaaaagcagagg
aaacttgagcaagaacgagcaatggaggaagagcgcaaaagagctcttgcactggaaaga
gagagggctctggagaaagagagaattgaacgacagcaggccttagaaagagaggagcga
gaaaaggctctgcagcgggagagagaactcgctctagaacgggagaggcaggagagggaa
ctagctttggctaaagagagggaggagcgagagcaagccttagcacgagagagggccttg
gagctggagaggcagaaggagcttgagagacagagggccctggagcaagaacgtctgcag
agagagaaagaggagagggagagacgtgagagggaagaaatggagagagtgatggaacta
gaaagagccaaggctttggagcaggaacggaaggagagagaaagggctctggagcaagag
agactagagagggagagagctctggaggctgagagaatggaaaaggagaggattgagaga
gagaaggctttggagcaagaaaggttggaaagggaaaggttagagagagagaaagcctta
gagcaagagagactagaaagagaaagagccttagagcaagagagactagagcaagagaga
ttagaaagagagaaagccttagagcaagagagactagaaagagaaagggccttagagcaa
gaaagactagaaagagagaaggccttagagcaagaaagactagaaagagagaaagcctta
gagcaagaaagactagaaagagagaaagccttagagcaagagagactagaaagagagaaa
gtcttagagcaagagagacttgaaagagagaaagccttggagcaagaaagactagagagg
gagagagccctggagaaagagcgactagagagggagagagccctggagaaagagcgacta
gagcaagagcgactagagcgggagaaagccttggagcaggagagactggagcgagacaga
attgagagggagaaagccttagaacaagagagactagaaagagaaagagctctagagcaa
gaaaggttggagcgggagagagccttagagcaacagaggttagagcttgagagaaaggaa
aaggagagaattgagagggagaaagcattggagcaagagaggatagagagggaagaagcc
ttggaaagagagaaggaggaaaaagagaggttagagagagaggcagctcttgaacagcag
aggaaagagaaggagagagcggagaaggagaggaaagaaaggctggagagggaaaaagct
ctagagcaggagaaacttgaaagggagagagccttggagaaggagagcgctctcaaactt
gaaaggttagagaaggagaaagctgtgcagaaagagaaggaggagcaggagagagccttg
gagcaggagaaagagagagctagggtggctgaaaaggagagggagagtcacctccctcca
tccaaacgtggccgtgagattggtctcacccccctgcccactcctccccccctctccaca
ggaccaggtggaaattcatcgacagaggcaggagagcaggaaggtgtccatgctccaatg
tcccagggtgaaggagcagaatcgggtgcacccatgtcatcgacacctctgtcgccccag
tcctccttcaagaagttccggttctttagagactccccagttcagacccaatcttctaac
acgtcaatagtaatcaagcggccccgtaacttctctgataccccccagcctcggtcatca
cctgtctcctccctcagcgaagttggacaacaacagcaggaaggactcaagtcctccgcc
gaacatcaagatccacagatgcaaacaaaacaggaagatgttgcccgggcgctgggatct
ctgggagcacagctggagaaagagaccactcttagtacaacaccaagtcccaaaaaagga
ggggccatgtgccttgtattggaggacaaagaaaaagatttggtgaagatggaacaggcc
gccaatgaatccaccaaaaaatctgaagtggatgaaagcaaggctccctcaagcccagtg
gatgctgtgcagcagaggggaagagatgaaaagaaggacgaaaaacaaaaacgaagatca
tcgtctaatgattcctcttcttcagaatcagactctgggtcctcatcatctggatcctct
ggctcatcctcatcctctcgagagaaaaccagctccacttcaagaggtagaagggaagag
aaaccttcaccaaagcccagggtgacactagaggctcaggctgaggatttaaaggaaact
caaaaagcccttccttgcaaaagagatatgtctgcagaaaagagtaacgctactgttgat
ggagacagtcacacaaagataccctttaatgaagcaccaaccagagaagagacaaaaagg
cagcgagaggacagcgaggaagaggaggaaacagacaaacaaagtcaggtgaaggagact
gccatggcagagtcagagaagcttccagagactggcgaggagacaccaaaggccttctca
gcccgtaagatctctattagcagcactggcagtgcagagggcgagcaggactctggggcc
acggccggtcgcaagaggaggtggggctccagcacagctgtcactgccaagaaaccttcc
atcagcatcaccacagattcactcaagtccctgatcccagacattcgtccatgtctcggt
caggaggcagtagtggacctgcacccagaggaagctgtcctctccggggcagaggatgaa
gagagggagcgttctgaccaggaccttcagatccgacgcactgtcacacaggtggtgcac
tcagagagccaggagaatggacagaaagaggcaaagaggagcagacacgaggaggtggag
gaggatgaccagcagggagacagagagaggacaggggcacatgaagagaagatggacacc
tcatttcctggagccattgaaacccaatctccatcacataccagccatgatgtagaaatt
aacactgtgacccccagcgacaccctcattcgtcgctccatcagccagcagaaaactggt
gtttccatcacaatcgatgaccctgttcgcactgcccggcagccctcgccacctcgcggc
aaagtctctaacattgttcacatctgcaacctggtgaggccgttcactctgggtcagctt
aaggaactgctcagcagaactggcactcttgtggaggagggcttctggatcgacaaaatc
aagtctcactgctacgtcacttactgtagctcagaggaggcagttgctacacgggcagct
cttcacggagtgaaatggcctcagagcaaccccaaagtccttagtgtagacttctgccaa
caggatgagctggacttccacaaaggcttgggtgcagccgacagacctggagcagaggac
caggggcctggctccggccgtggtcgaacatcgggcctgccctctctcctaccggagcgt
gaccagtgggcagagcgtgagcgtgagatggagcgccgggagagggccagagcagagcgg
gagtgggatcgcgacaaggtcagagagtttgggaaacccggtgaggagaaggagggaggt
ccccgaaggtcacgctccagagagagacgacgcaaggagagggggaagagcaaggagaag
aagactgagaagaaagagaaaacagcggaggatcctcctgcaaagctgcttgacgatctg
ttcctcaaaactaaagcagctccttgcatatactggcttccacttacagaggagcagttt
gttcagcgggaagctgccagagcagaacggatgaaggagcgtgagaaacggaggaaggag
ctagacgaggaggaggagaaaaaaaaggaagaggagcgcaaagagaggatgaaagctgga
agcgggccaaccggagagcggagtgagggtgagaaggaaagggaaagggacagagagagg
gacagagacagagaccggggtagagatagagacagggagagggagagggagaacgacaaa
cgcagggatggctaccgtaggccagagggccgtggggcaggcgggggcagacgctcacgt
agccgcagcgacccgcgagaaaggcgacgttaa
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