KEGG   Plectropomus leopardus (leopard coralgrouper): 121951519
Entry
121951519         CDS       T07454                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
plep  Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:plep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    121951519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plep03400]
    121951519
DNA repair and recombination proteins [BR:plep03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     121951519
SSDB
Motif
Pfam: DUF3337 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EIPR1 NBCH_WD40 Beta-prop_DCAF12 Beta-prop_SPT8 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_IP5PC_F Beta-prop_DCAF4 Beta-prop_RIG_2nd WD_LRWD1 Beta-prop_IFT140_1st WDR54 RAWUL Beta-prop_HPS5 Tfb2_C
Other DBs
NCBI-GeneID: 121951519
NCBI-ProteinID: XP_042353814
LinkDB
Position
12:complement(2051770..2067476)
AA seq 684 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQVSTDLAVSGSSDGTIR
LWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKA
PVLKMELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCSTPLTPLCTQPEQ
VIKGGASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVY
VPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWP
RTRINPMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFREPLLCRDS
GGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQV
RKVMEHVYEKIINLDNESQTTSSSANDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMD
LRTVKHFIWKSGGDLTLHYRQKST
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggagaaaagtacaggtgtcgtacgtc
attagagatgaggtggagaagtacaaccgaaatggggtgaacgcgctccagctcgaccct
gcgctgaaccggctcttcaccgctggacgggactctatcatccggatatggagcgtctac
cagcataaacaggacccgtacattgcctccatggagcatcacacagactgggttaatgac
atagtgctctgctgcaatggaaaaacattgatatctgcctcatcggacacaacggtcaaa
gtgtggaacgcgcataaaggcttctgcatgtcgacgttacgaacacacaaggactacgtg
aaagctctggcctacgccaaggacaaggagctggtggcgtccgcaggtctggaccggcag
atctttctttgggacgtgaacacactaacagcgctcactgcttccaacaacactgtcacc
acctcgtcactcagcgggaacaaggactccatctacagtctggctatgaaccagatgggc
acagtcatcgtatctggatctacagaaaaggtcctgagagtttgggaccctcgaacatgt
gcaaaactgatgaagctaaaaggacacacagacaacgtcaagtcgctgctgctgaatcga
gacggcactcaagtgagtacagatcttgctgtgtcgggcagctcggacgggaccatccgc
ctgtggtcgctcggccagcagagatgcatcgccacctaccgggtgcacgacgaaggcgtc
tgggccctgcaggtcaacgaggcctttacacacgtctactctggaggcagagacaaaaag
atctactgcactgacctgcgtaacccggacatccgcgtgctcatctgtgaggagaaggcc
ccggtgctcaaaatggaactggacagatctgctgacccacctccagcaatctgggtctcc
accaccaagtcatccgttaataaatggtctctaaagggaatgcacaacttccgatcatcg
ggggagtacgacaacgactgcagtacccctctgactccactgtgtactcagccagagcaa
gtcatcaagggcggtgccagtatcatacagtgccacattctgaatgacaagagacacata
ctcaccaaagataccaacaacaatgtggctttctgggatgtcctcaaggcttgtaagggt
gaagacttgggaaaagtggagtttgatgaagagattaaaaagcgattcaagatggtctac
gtgccaaactggttctctgttgatctgaaaactgggatgctcacaatcactttggacgag
agcgactgcttcgctgcctgggtgtctgcaaaggacgccgggttttcaagctccgacgga
tccgacccaaagttgaacctgggtggactgctgctgcaggctctgctcgagttctggccc
cgaactcgcatcaaccccatggacgaggaggagaacgaggtgaaccacgtgaacggagag
caggagaacagggtccagaaaggaaatggatatttccaagtgccaccacacacgccagtc
atcttcggggaagccggaggcagaactctatttagggaacctttattgtgtagagactca
ggaggagagactgaatcgatgctgctgaacgagacggttcctcagtgggttattgatata
actgtagataaaaatatgcccaagttcaacaaaatcccgttctacctccagccgcattct
tcctccggagcaaaaactctgaagaaggaccgtctctcggccagcgacatgcttcaggtg
aggaaggtgatggagcacgtttacgagaagatcatcaacctggacaacgagtcgcagacc
accagctcctcggccaacgacaagccgggggagcaggagaaggaggaggacatggccatg
ctcgccgaggagaagatcgaactaatgtgtcaagaccaggttctagatcccaacatggac
ctgcgaacagttaaacattttatctggaagagcggaggggacttgacgcttcactatagg
cagaagtccacgtga

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