Plectropomus leopardus (leopard coralgrouper): 121951801
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Entry
121951801 CDS
T07454
Symbol
exosc4
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121951801 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121951801 (exosc4)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121951801 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
121951801 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
121951801
NCBI-ProteinID:
XP_042354216
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All DBs
Position
12:11372745..11375476
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AA seq
268 aa
AA seq
DB search
MGNVVQRQTRGFVRRCSFEVCGNMAGMELLSDQGYRLDGRKATELRKVQARMGVFAQADG
SAYLEQGNTKALAVVYGPHEIRGSRSRVRHDRAVINCQYSMATFSTADRKRRPHGDRKST
EMSLHLKQTFEAAVMTQLYPRSQIDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYV
CACTVGFVDETPLADLCYAEESGGVSSLALALLPRGGQIALLQMDARLHQDHLESLIEAA
MTACKGVSKVLDQVVRQHLQEVSTLSRE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgtagtacagcggcagacacgtgggtttgttcgtcgctgttcattcgaagtt
tgcggaaacatggcggggatggagctgctgtctgaccagggttaccgcctggatggaaga
aaagccaccgagctgcggaaggttcaggcccggatgggagtcttcgctcaggcggacggc
tccgcgtatctggagcagggaaacacgaaggctctggctgtggtgtacggaccgcatgag
attcgaggttcacgcagccgcgttcgtcacgatcgagccgtcatcaactgtcagtacagc
atggccacgttcagcacggcggacaggaagaggagaccacatggggaccgcaagtcgacg
gagatgagcctccacctgaagcagacgtttgaggctgctgtgatgactcagctctatcct
cgctctcaaatagacatctacgtaaagatcctgcagtcagatggaggaaactacagcgtg
tgtgtgaacgctgccactctggccgtgattgacgccggcatccccatgcgggactacgtg
tgcgcctgcacagtcgggtttgtggatgagacgcccctcgctgacctttgctatgcagag
gaaagtggcggagtgagctctctggccttagcgctgctcccccggggcggacagatcgct
ttgctgcagatggacgccaggctacaccaggatcacttagagtctcttatcgaagccgcc
atgacagcctgtaaaggtgtgagcaaggtgctggatcaggtggtgcgacaacatctccaa
gaagtttctacactctctagagagtga
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