Plectropomus leopardus (leopard coralgrouper): 121951885
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Entry
121951885 CDS
T07454
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121951885 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121951885 (gtf2b)
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
121951885 (gtf2b)
Prokaryotic type
Archaeal type
TFB
121951885 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Harpin
Motif
Other DBs
NCBI-GeneID:
121951885
NCBI-ProteinID:
XP_042354306
LinkDB
All DBs
Position
12:20016292..20024346
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AA seq
318 aa
AA seq
DB search
MASTSRGDGLTLPRVQCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEISTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgtggagatggtctgacccttcccagagttcagtgtcccaaccac
cctgatgccatcctggtggaggactacagagcaggggacatgatttgccctgaatgcggc
cttgtagtaggtgaccgtgtaattgatgtgggctcagagtggagaacgttttccaacgag
aaagccctcaaagatccttccagagtgggagacgcccagaacccgctgctgaacggcggc
gacctaaccaccatgattggcaagggaactggcgctgctagttttgatgagtttggtaac
tcgaagtatcagaaccggcgaaccatgagcagctctgaccgggccatgctcaacgccttc
aaagaaatcagcaccatggcagatcgcatcaacctgccaaggaacatcatagacagaaca
aacaatttattcaagcaggtttatgaacagaagagcctgaaggggcgagccaacgatgcc
atcgcttcggcctgtctctacatcgcctgcagacaggaaggcgtgccacgaacatttaaa
gagatttgcgctgtctcgcggatctccaagaaggagatcggcaggtgcttcaagctgatc
ctgaaggcgctggagaccagcgtggacctcatcaccaccggagacttcatgtcccgcttc
tgctcaaacctcggtttacccaaacaggtgcagatggcggccaccttcatcgccaggaag
gccgtggagctcgacctggtgcccggcaggagccccatctcagtggctgctgcagccatc
tacatggcctcccaggcctcggccgagaagaagacccaaaaagaaatcggggatatcgcc
ggcgtcgcagacgttacgatcagacagtcgtaccgactcatctacccacgtgctgcagaa
ctcttccctccagacttcaaattcgacacaccggtcgacaaactgccccaactgtga
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